Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3b14
(731 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated prot... 31 4.3
BC110619-1|AAI10620.1| 174|Homo sapiens keratin associated prot... 30 7.4
AY672837-1|AAT77412.1| 546|Homo sapiens immunoglobulin-like dom... 30 7.4
AY134857-1|AAN10256.1| 265|Homo sapiens unknown protein. 30 7.4
AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency ... 30 7.4
AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency ... 30 7.4
AJ406946-1|CAC27585.1| 174|Homo sapiens keratin associated prot... 30 7.4
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom... 30 7.4
AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein. 30 7.4
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 30 9.8
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 30 9.8
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 30 9.8
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 30 9.8
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 30 9.8
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 30 9.8
AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated prot... 30 9.8
AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated prot... 30 9.8
AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated prot... 30 9.8
>AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated protein
9.9 protein.
Length = 154
Score = 31.1 bits (67), Expect = 4.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 106 CCCYCWNPCAKPACCSNEYWCYTRHRPT 189
C C PC +PACC N T +PT
Sbjct: 43 CVSSCCQPCCRPACCQNTCCRTTCCQPT 70
>BC110619-1|AAI10620.1| 174|Homo sapiens keratin associated protein
9-2 protein.
Length = 174
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 100 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 264
THCC +PC +P CC T +PT +T T+ + C+ + C P
Sbjct: 2 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRP 54
>AY672837-1|AAT77412.1| 546|Homo sapiens immunoglobulin-like
domain-containing receptor 1 alpha protein.
Length = 546
Score = 30.3 bits (65), Expect = 7.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 103 HCCCYCWNPCAKPACCSNEYWCYTRHR 183
+CCCY PC CC E RHR
Sbjct: 196 YCCCYIRCPCCPAHCCCPEE-ALARHR 221
>AY134857-1|AAN10256.1| 265|Homo sapiens unknown protein.
Length = 265
Score = 30.3 bits (65), Expect = 7.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 103 HCCCYCWNPCAKPACCSNEYWCYTRHR 183
+CCCY PC CC E RHR
Sbjct: 196 YCCCYIRCPCCPAHCCCPEE-ALARHR 221
>AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 3 protein.
Length = 2406
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 103 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 252
+ C YC PCAKP+ +T RP + + + LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241
>AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 3 protein.
Length = 2405
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 103 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 252
+ C YC PCAKP+ +T RP + + + LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241
>AJ406946-1|CAC27585.1| 174|Homo sapiens keratin associated protein
9.2 protein.
Length = 174
Score = 30.3 bits (65), Expect = 7.4
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +1
Query: 100 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 264
THCC +PC +P CC T +PT +T T+ + C+ + C P
Sbjct: 2 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRP 54
>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
recombination signal sequences binding protein protein.
Length = 2406
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 103 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 252
+ C YC PCAKP+ +T RP + + + LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241
>AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.
Length = 2414
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 103 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 252
+ C YC PCAKP+ +T RP + + + LY+ R++
Sbjct: 201 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 250
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 9.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 100 THCCCYCWNPCAKPACCSNEYW 165
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 9.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 100 THCCCYCWNPCAKPACCSNEYW 165
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 9.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 100 THCCCYCWNPCAKPACCSNEYW 165
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 9.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 100 THCCCYCWNPCAKPACCSNEYW 165
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 9.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 100 THCCCYCWNPCAKPACCSNEYW 165
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 9.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 100 THCCCYCWNPCAKPACCSNEYW 165
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated protein
4.4 protein.
Length = 166
Score = 29.9 bits (64), Expect = 9.8
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 106 CCC--YCWNPCAKPACCSNEYWCYTRHRPT 189
CCC YC + C +P CC T RP+
Sbjct: 120 CCCPSYCVSSCCRPQCCQTTCCRTTCCRPS 149
>AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated protein
protein.
Length = 106
Score = 29.9 bits (64), Expect = 9.8
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 106 CCC--YCWNPCAKPACCSNEYWCYTRHRPT 189
CCC YC + C +P CC T RP+
Sbjct: 60 CCCPSYCVSSCCRPQCCQTTRCRTTCCRPS 89
>AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated protein
protein.
Length = 165
Score = 29.9 bits (64), Expect = 9.8
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +1
Query: 97 RTHCC--CYCWNPCAKPACCSN 156
++ CC C C + C KP CCS+
Sbjct: 113 QSSCCKPCCCQSSCCKPCCCSS 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,927,479
Number of Sequences: 237096
Number of extensions: 1196816
Number of successful extensions: 2095
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -