Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b11
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     27   0.46 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           27   0.80 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.5  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
 Frame = +3

Query: 504 NGFLNRPPHSQPTISSVTTRPQKPMY-----PSTRPPFFSGGYFGNNPYRPQPIQHPSGG 668
           +G + R P  QP    +  RP +P +     P  RPP+     FG  P+  +P  H    
Sbjct: 61  SGSVERNPAIQPV--GIFGRPGRPWWSVPGIPPFRPPWHPRPPFGGRPWWLRPPFHRPTT 118

Query: 669 PLNHVVGVSPAKPT 710
                 G S A PT
Sbjct: 119 STAAPEGTSVASPT 132


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 11/139 (7%)
 Frame = +3

Query: 357 SPFNDLQENPQEDDANDCGEIEDYDENDLSSITXXXXXXXXXHGHRNYFNGFLNRPPHSQ 536
           SP  D++  P++DDA D        E+ +  +          +G   Y N +      S+
Sbjct: 141 SPAGDVRV-PEDDDAAD--------ESMIHQLPRGWEERSAQNGRTYYVNHYTKTTQWSR 191

Query: 537 PTISS---VTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPIQHPSGGPLNHVVGVS---- 695
           PT  +   V          S+ P   +G   G     PQ  QH  G P +   GV     
Sbjct: 192 PTEPAGPPVRQSGNNNAANSSTPLTVNGTVNGGGVPHPQQQQHILGSPTSATNGVGEESG 251

Query: 696 ----PAKPTRKPTQYDVTS 740
               PA P++  T + + S
Sbjct: 252 CPTIPAGPSKSATNHSINS 270


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 707  RLGWRNANHMIQGPTRW 657
            RLGW N + + +G  +W
Sbjct: 1175 RLGWENVDELQEGQFQW 1191


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +3

Query: 522  PPHSQPTISSVTTRPQKPMYPSTRPPFFSGGYFGNNPYRPQPI 650
            PP +  +     + P  P+ P T  P     Y   N  +P P+
Sbjct: 1248 PPRALMSAGGFASPPASPLVPDTAVPDPHSLYAIPNKVKPSPL 1290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,995
Number of Sequences: 2352
Number of extensions: 15765
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)