Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b10
         (334 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E478E9 Cluster: PREDICTED: similar to MGC83954 p...    36   0.24 
UniRef50_Q1QWL7 Cluster: Molybdopterin dehydrogenase, FAD-bindin...    31   6.7  
UniRef50_UPI0000164CF3 Cluster: transcriptional activator TipA; ...    30   8.9  
UniRef50_Q83C66 Cluster: Putative uncharacterized protein; n=3; ...    30   8.9  
UniRef50_Q54WP6 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_UPI0000E478E9 Cluster: PREDICTED: similar to MGC83954
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MGC83954 protein -
           Strongylocentrotus purpuratus
          Length = 240

 Score = 35.5 bits (78), Expect = 0.24
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 84  CKECAIFAQSPG-FGTRCVSVATRRHIFSVESVEVEGALSFCCLTSNSANFLLN 242
           C+ECA F +    F  + +        FSVE++E     S+C LTSN  N L N
Sbjct: 90  CEECATFTKKENEFFNKHLKALMNGCNFSVETLEEGQTNSYCKLTSNHRNILFN 143


>UniRef50_Q1QWL7 Cluster: Molybdopterin dehydrogenase, FAD-binding;
           n=1; Chromohalobacter salexigens DSM 3043|Rep:
           Molybdopterin dehydrogenase, FAD-binding -
           Chromohalobacter salexigens (strain DSM 3043 / ATCC
           BAA-138 / NCIMB13768)
          Length = 484

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 97  RSSLSPQGSVPAAYLWRPADT--FSVWRVLKWRERSVSAVL 213
           R++L+P   + A +L RPA      VW++ K RE  +SAVL
Sbjct: 344 RTALAPGEFIRAIFLPRPAGDRRLEVWKLSKRREDDISAVL 384


>UniRef50_UPI0000164CF3 Cluster: transcriptional activator TipA;
           n=1; Deinococcus radiodurans R1|Rep: transcriptional
           activator TipA - Deinococcus radiodurans R1
          Length = 185

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 106 LSPQGSVPAAY-LWRPADTFSVWRVLKWRERSVS 204
           LSP     A Y L+ PAD   +WR+L +RE   S
Sbjct: 38  LSPSARSEAGYRLYTPADVARLWRILTFRELGFS 71


>UniRef50_Q83C66 Cluster: Putative uncharacterized protein; n=3;
           Coxiella burnetii|Rep: Putative uncharacterized protein
           - Coxiella burnetii
          Length = 128

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = +3

Query: 99  IFAQSPGFGTRCVSVATRRHIFSVESVEVEGALSFCCLTSNSAN 230
           IF  S  FGT   S  TR+        E +G LSFCCL   S N
Sbjct: 73  IFISSLLFGTGMRSPETRQRFMQ----EFQGCLSFCCLFRRSHN 112


>UniRef50_Q54WP6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 617

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +3

Query: 165 SVESVEVEGALSFCCLTSNSANFLLNISVNCAMDC*IPSIVR 290
           S  S+E + A S C   SNS    LNIS N   D  IP +++
Sbjct: 531 SNNSIEPDVATSLCSAISNSQILKLNISTNKLDDTVIPPLIQ 572


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,158,199
Number of Sequences: 1657284
Number of extensions: 5135037
Number of successful extensions: 13423
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13423
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)