Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b10
         (334 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   3.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    20   5.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 165 SVESVEVEGALSFCCLTSNSAN 230
           S+++V+     ++ CL SNSA+
Sbjct: 664 SIDNVQSTHVGNYTCLASNSAS 685


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 257 CHGLLNTFHC 286
           CH L+N+F C
Sbjct: 237 CHDLVNSFSC 246


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 13  VHYYIK*TFYYFYLEPLLF 69
           VH  +    YYFY   LLF
Sbjct: 250 VHLLLLVCIYYFYYMHLLF 268


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 283 MEGIQQSMAQLTDIFNKKF 227
           MEG+  S+ +L  IFN+ F
Sbjct: 194 MEGLVCSIKELNMIFNEFF 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,458
Number of Sequences: 336
Number of extensions: 1485
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)