Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3b10
(334 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL139342-1|CAI18866.1| 937|Homo sapiens pecanex-like 2 (Drosoph... 28 6.0
AL133289-2|CAI22873.1| 777|Homo sapiens pecanex-like 2 (Drosoph... 28 6.0
AL133289-1|CAI22872.1| 937|Homo sapiens pecanex-like 2 (Drosoph... 28 6.0
AL122003-2|CAI22241.1| 777|Homo sapiens pecanex-like 2 (Drosoph... 28 6.0
AL122003-1|CAI22240.1| 937|Homo sapiens pecanex-like 2 (Drosoph... 28 6.0
AK074078-1|BAB84904.1| 792|Homo sapiens FLJ00149 protein protein. 28 6.0
AB007895-1|BAA23708.2| 787|Homo sapiens KIAA0435 protein. 28 6.0
M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein. 28 7.9
CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein. 28 7.9
BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complement... 28 7.9
AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complement... 28 7.9
AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross comp... 28 7.9
>AL139342-1|CAI18866.1| 937|Homo sapiens pecanex-like 2
(Drosophila) protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 10 IVHYYIK*TFYYFYLEPLLFERLKNVKSARSSLSP 114
++ YYIK YY P L +KN +S SL P
Sbjct: 329 LIRYYIKSIIYYMVTSPKLLSWIKN-ESLLKSLQP 362
>AL133289-2|CAI22873.1| 777|Homo sapiens pecanex-like 2
(Drosophila) protein.
Length = 777
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 10 IVHYYIK*TFYYFYLEPLLFERLKNVKSARSSLSP 114
++ YYIK YY P L +KN +S SL P
Sbjct: 181 LIRYYIKSIIYYMVTSPKLLSWIKN-ESLLKSLQP 214
>AL133289-1|CAI22872.1| 937|Homo sapiens pecanex-like 2
(Drosophila) protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 10 IVHYYIK*TFYYFYLEPLLFERLKNVKSARSSLSP 114
++ YYIK YY P L +KN +S SL P
Sbjct: 329 LIRYYIKSIIYYMVTSPKLLSWIKN-ESLLKSLQP 362
>AL122003-2|CAI22241.1| 777|Homo sapiens pecanex-like 2
(Drosophila) protein.
Length = 777
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 10 IVHYYIK*TFYYFYLEPLLFERLKNVKSARSSLSP 114
++ YYIK YY P L +KN +S SL P
Sbjct: 181 LIRYYIKSIIYYMVTSPKLLSWIKN-ESLLKSLQP 214
>AL122003-1|CAI22240.1| 937|Homo sapiens pecanex-like 2
(Drosophila) protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 10 IVHYYIK*TFYYFYLEPLLFERLKNVKSARSSLSP 114
++ YYIK YY P L +KN +S SL P
Sbjct: 329 LIRYYIKSIIYYMVTSPKLLSWIKN-ESLLKSLQP 362
>AK074078-1|BAB84904.1| 792|Homo sapiens FLJ00149 protein protein.
Length = 792
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 10 IVHYYIK*TFYYFYLEPLLFERLKNVKSARSSLSP 114
++ YYIK YY P L +KN +S SL P
Sbjct: 184 LIRYYIKSIIYYMVTSPKLLSWIKN-ESLLKSLQP 217
>AB007895-1|BAA23708.2| 787|Homo sapiens KIAA0435 protein.
Length = 787
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 10 IVHYYIK*TFYYFYLEPLLFERLKNVKSARSSLSP 114
++ YYIK YY P L +KN +S SL P
Sbjct: 191 LIRYYIKSIIYYMVTSPKLLSWIKN-ESLLKSLQP 224
>M36089-1|AAA63270.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 103 SLSPQGSVPAAYLWRPADTFSVWRVLKWRERSVSAVL 213
S S Q S A ADT+ WR K E+++S VL
Sbjct: 11 SCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVL 47
>CR456728-1|CAG33009.1| 633|Homo sapiens XRCC1 protein.
Length = 633
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 103 SLSPQGSVPAAYLWRPADTFSVWRVLKWRERSVSAVL 213
S S Q S A ADT+ WR K E+++S VL
Sbjct: 11 SCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVL 47
>BC023593-1|AAH23593.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 103 SLSPQGSVPAAYLWRPADTFSVWRVLKWRERSVSAVL 213
S S Q S A ADT+ WR K E+++S VL
Sbjct: 11 SCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVL 47
>AF512504-1|AAM34791.1| 633|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 1 protein.
Length = 633
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 103 SLSPQGSVPAAYLWRPADTFSVWRVLKWRERSVSAVL 213
S S Q S A ADT+ WR K E+++S VL
Sbjct: 11 SCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVL 47
>AB208781-1|BAD92018.1| 647|Homo sapiens X-ray repair cross
complementing protein 1 variant protein.
Length = 647
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 103 SLSPQGSVPAAYLWRPADTFSVWRVLKWRERSVSAVL 213
S S Q S A ADT+ WR K E+++S VL
Sbjct: 25 SCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVL 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,489,865
Number of Sequences: 237096
Number of extensions: 775056
Number of successful extensions: 1576
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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