Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b08
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   5.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 710 KGFHKISRNYFYPTLWRSNKAR 645
           K ++ + R Y++P ++R+ K R
Sbjct: 147 KVYNSMKREYYWPNMYRTIKKR 168


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 121 VAAIIRKNKLLKVSLFDHEFHTDCFEQSGDAQI*RSGGALRCY 249
           +  +++K+KLL++      F T C E S      R    L CY
Sbjct: 94  ICTLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRLLCY 136


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 121 VAAIIRKNKLLKVSLFDHEFHTDCFEQSGDAQI*RSGGALRCY 249
           +  +++K+KLL++      F T C E S      R    L CY
Sbjct: 112 ICTLLKKDKLLELFKRLIHFDTKCQENSTVIDYKRHKKRLLCY 154


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 608 PLGWPVGGFPAPPGP 652
           PL W     P+PP P
Sbjct: 63  PLAWQANSPPSPPAP 77


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 449 NHILVLADTYQFNYQPTSSNHRKNCTII 532
           N +++L D Y   Y   ++N  K CT +
Sbjct: 224 NFVVLLGDLYVTLYIILTNNQAKYCTTL 251


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 377 QANPDNSDTFIFPEVIYHD 433
           Q NPDN + +   E +Y D
Sbjct: 368 QLNPDNPNVYEILEKLYKD 386


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 427 PRPV*TWKPHISVS 468
           PRPV TWK    VS
Sbjct: 726 PRPVVTWKRATGVS 739


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,541
Number of Sequences: 336
Number of extensions: 4156
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)