Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b05
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.69 
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    23   2.8  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    22   3.7  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   3.7  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   3.7  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   3.7  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   3.7  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   3.7  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    22   3.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.4  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   8.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.4  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 9/45 (20%), Positives = 20/45 (44%)
 Frame = -2

Query: 464 RRTELRYADNSQNHDEHWYNQINQQRQDSTEQPPQTNHHQETGQH 330
           R+ ++ + +    + ++   Q  QQ+ ++       NHH   G H
Sbjct: 285 RQVKIWFQNRRMKNKKNSQRQAAQQQNNNNAATNNQNHHHHAGHH 329


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 106 VNGEGISELYGP 71
           V G G SE+YGP
Sbjct: 86  VTGSGTSEMYGP 97


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 437 CLRTSAPCAAIGTKLSGS 490
           C    APC A+G ++ G+
Sbjct: 38  CALDKAPCDALGNQIKGA 55


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 103 NGEGISELYGPFF 65
           +G G SE+YGP F
Sbjct: 114 SGSGSSEIYGPEF 126


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 103 NGEGISELYGPFF 65
           +G G SE+YGP F
Sbjct: 114 SGSGSSEIYGPEF 126


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 103 NGEGISELYGPFF 65
           +G G SE+YGP F
Sbjct: 114 SGSGSSEIYGPEF 126


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 103 NGEGISELYGPFF 65
           +G G SE+YGP F
Sbjct: 114 SGSGSSEIYGPEF 126


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 103 NGEGISELYGPFF 65
           +G G SE+YGP F
Sbjct: 113 SGSGSSEIYGPEF 125


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 103 NGEGISELYGPFF 65
           +G G SE+YGP F
Sbjct: 86  SGSGSSEIYGPEF 98


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 257 RRQRRHAEAMSQQTPGPPATVSLHIRSYFIDRP 159
           R  +R    + + +P P ++VS  ++    DRP
Sbjct: 102 RGPKRKTWKVEEDSPSPTSSVSPEVKDSSRDRP 134


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 495 SPEPDSFVPIAAHGA 451
           SPEPD  +P+A   A
Sbjct: 79  SPEPDPEIPVAPEPA 93


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +2

Query: 488 SGESIAKYIDENGGKYQNVIYLLEKLFIW 574
           +  +  K +   GGKY+ V +   K   W
Sbjct: 509 ASRAFKKIVTYKGGKYRKVTFQCLKSIAW 537


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 395 QQRQDSTEQPPQTNHHQETG 336
           Q  + ST Q PQT    E+G
Sbjct: 417 QPTESSTTQKPQTTKTPESG 436


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 245 RHAEAMSQQTPGPPATVSLH 186
           +H +  S Q PG P  +S H
Sbjct: 137 KHPDPGSLQVPGAPMMMSSH 156


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 342 NWPTSPAPPRVQLATP 295
           N   SPAPP  + A+P
Sbjct: 40  NSAASPAPPEEEAASP 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,753
Number of Sequences: 336
Number of extensions: 3021
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)