Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b03
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   1.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 413 IMWSKPLLMTFHSSF 369
           IMW + +L+TF S+F
Sbjct: 264 IMWDRVMLLTFWSAF 278


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = -2

Query: 692 CCVTKYRVSIAACLSDSVQPHNSSSSVAFLPFLPNVSLVELSAANLVSFVFIIWVK--RY 519
           C   K+ V++   L    + HNS  S+  L ++    ++ +  + +V +VF   +   RY
Sbjct: 227 CNKIKHLVNLHKNLVKVAKDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVRY 286

Query: 518 IIILVIFR 495
           ++++ + +
Sbjct: 287 VMVVYLLK 294


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 137 YVITFIKVSCLKVYLYYKLNSNTAPTKSVCFQN 39
           ++IT I ++C   Y+  +   N +   +  FQN
Sbjct: 164 HIITMINMNCALWYINCRAVGNASTALAESFQN 196


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 137 YVITFIKVSCLKVYLYYKLNSNTAPTKSVCFQN 39
           ++IT I ++C   Y+  +   N +   +  FQN
Sbjct: 164 HIITMINMNCALWYINCRAVGNASTALAESFQN 196


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 137 YVITFIKVSCLKVYLYYKLNSNTAPTKSVCFQN 39
           ++IT I ++C   Y+  +   N +   +  FQN
Sbjct: 164 HIITMINMNCALWYINCRAVGNASTALAESFQN 196


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -2

Query: 284 SC-NFDNMSRGCTTSST 237
           SC +FD + R CTT+S+
Sbjct: 20  SCKDFDTLYRDCTTASS 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,988
Number of Sequences: 336
Number of extensions: 3394
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)