Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b03
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    25   1.8  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   1.8  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   1.8  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.1  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.1  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    24   4.1  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    23   7.2  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 719 GGSHNLDNGCCVTKYRVSIAACLSDSVQPHNSSS-SVAFLPFLPNVSLVELSAANLVS 549
           G  H L+NG  +  +++S AA +  S Q   S S +   +  +P       S+++L+S
Sbjct: 40  GRHHELNNGAAIGSHQLSAAAGVGLSSQSAQSGSLASGVMSSVPAAGASSSSSSSLLS 97


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 719 GGSHNLDNGCCVTKYRVSIAACLSDSVQPHNSSS-SVAFLPFLPNVSLVELSAANLVS 549
           G  H L+NG  +  +++S AA +  S Q   S S +   +  +P       S+++L+S
Sbjct: 40  GRHHELNNGAAIGSHQLSAAAGVGLSSQSAQSGSLASGVMSSVPAAGASSSSSSSLLS 97


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -2

Query: 635 PHNSSSSVAFLP----FLPNVSLVELSAANLVSFVFIIWVKRYIIILVIFRF 492
           P N S ++   P    +LP +S++ L   +    + + WV R   IL++  F
Sbjct: 356 PKNRSPAIEVYPSLLVYLPQISIILLQQLSAAMKLKLSWVFRVSDILILVHF 407


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +1

Query: 391 NKGFDHIIRAAKNLCSHLELILQEQELDVDVRVKNLNITKMIMYLFT 531
           +K   HI++  + + + ++   +EQEL  D +   + + +  +++FT
Sbjct: 424 HKDLHHILKELQFITNRMKKADEEQELISDWKFAAMVVDRFCLFVFT 470


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +1

Query: 391 NKGFDHIIRAAKNLCSHLELILQEQELDVDVRVKNLNITKMIMYLFT 531
           +K   HI++  + + + ++   +EQEL  D +   + + +  +++FT
Sbjct: 424 HKDLHHILKELQFITNRMKKADEEQELISDWKFAAMVVDRFCLFVFT 470


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 611 QQKKKNYVVGQNLTSKRQCS 670
           +++ KNY +GQN+  KR  S
Sbjct: 39  EKRVKNYGIGQNVQPKRDLS 58


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/30 (33%), Positives = 10/30 (33%)
 Frame = -2

Query: 281 CNFDNMSRGCTTSST*YCPAWDSNNSSFCK 192
           C   N   GC   S   CP  D      CK
Sbjct: 12  CTSPNCGAGCGCESRCTCPCKDGAKEGCCK 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,235
Number of Sequences: 2352
Number of extensions: 13989
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)