Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b03
         (723 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D63880-1|BAA09930.2| 1406|Homo sapiens KIAA0159 protein.               59   2e-08
BC028182-1|AAH28182.1| 1401|Homo sapiens non-SMC condensin I com...    59   2e-08
BC016913-1|AAH16913.1|  394|Homo sapiens Unknown (protein for IM...    59   2e-08
AK125155-1|BAC86066.1|  939|Homo sapiens protein ( Homo sapiens ...    42   0.002
BC017381-1|AAH17381.1|  129|Homo sapiens LRP12 protein protein.        30   7.3  
AK022991-1|BAB14350.1|  129|Homo sapiens protein ( Homo sapiens ...    30   7.3  

>D63880-1|BAA09930.2| 1406|Homo sapiens KIAA0159 protein.
          Length = 1406

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +1

Query: 175 FEFAIPLQKDELLESHA-GQYHVEDVVQPRLMLSKLQDGARAYNSVGVDYILEHFDTYFS 351
           +EF +PL  +ELL+S    QY V++V+  + +  +L+    A+ + G   +L+HFDT +S
Sbjct: 11  YEFHLPLSPEELLKSGGVNQYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYS 70

Query: 352 IIVHGVKLEWNVINKGFDHIIRAAKNLCSHLELILQEQELDVDVRVKNLNITKMIMYLFT 531
           I+ H   ++  +     + +I+        L  IL +  L    R  +LN  KM  Y   
Sbjct: 71  ILHHFRSIDPGLKEDTLEFLIKVVSRHSQELPAILDDTTLSGSDRNAHLNALKMNCYALI 130

Query: 532 QIMKTKDTKLAADN 573
           +++++ +T  +  N
Sbjct: 131 RLLESFETMASQTN 144


>BC028182-1|AAH28182.1| 1401|Homo sapiens non-SMC condensin I
           complex, subunit D2 protein.
          Length = 1401

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +1

Query: 175 FEFAIPLQKDELLESHA-GQYHVEDVVQPRLMLSKLQDGARAYNSVGVDYILEHFDTYFS 351
           +EF +PL  +ELL+S    QY V++V+  + +  +L+    A+ + G   +L+HFDT +S
Sbjct: 6   YEFHLPLSPEELLKSGGVNQYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYS 65

Query: 352 IIVHGVKLEWNVINKGFDHIIRAAKNLCSHLELILQEQELDVDVRVKNLNITKMIMYLFT 531
           I+ H   ++  +     + +I+        L  IL +  L    R  +LN  KM  Y   
Sbjct: 66  ILHHFRSIDPGLKEDTLEFLIKVVSRHSQELPAILDDTTLSGSDRNAHLNALKMNCYALI 125

Query: 532 QIMKTKDTKLAADN 573
           +++++ +T  +  N
Sbjct: 126 RLLESFETMASQTN 139


>BC016913-1|AAH16913.1|  394|Homo sapiens Unknown (protein for
           IMAGE:4419375) protein.
          Length = 394

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +1

Query: 175 FEFAIPLQKDELLESHA-GQYHVEDVVQPRLMLSKLQDGARAYNSVGVDYILEHFDTYFS 351
           +EF +PL  +ELL+S    QY V++V+  + +  +L+    A+ + G   +L+HFDT +S
Sbjct: 6   YEFHLPLSPEELLKSGGVNQYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYS 65

Query: 352 IIVHGVKLEWNVINKGFDHIIRAAKNLCSHLELILQEQELDVDVRVKNLNITKMIMYLFT 531
           I+ H   ++  +     + +I+        L  IL +  L    R  +LN  KM  Y   
Sbjct: 66  ILHHFRSIDPGLKEDTLEFLIKVVSRHSQELPAILDDTTLSGSDRNAHLNALKMNCYALI 125

Query: 532 QIMKTKDTKLAADN 573
           +++++ +T  +  N
Sbjct: 126 RLLESFETMASQTN 139


>AK125155-1|BAC86066.1|  939|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43165 fis, clone FCBBF3002163, highly  similar
           to Homo sapiens chromosome condensation-related
           SMC-associated protein 1. ).
          Length = 939

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +1

Query: 175 FEFAIPLQKDELLESHA-GQYHVEDVVQPRLMLSKLQDGARAYNSVGVDYILEHFDTYFS 351
           +EF +PL  +ELL+S    QY V++V+  + +  +L+    A+ + G   +L+HFDT +S
Sbjct: 6   YEFHLPLSPEELLKSGGVNQYVVQEVLSIKHLPPQLRAFQAAFRAQGPLAMLQHFDTIYS 65

Query: 352 II 357
           I+
Sbjct: 66  IL 67


>BC017381-1|AAH17381.1|  129|Homo sapiens LRP12 protein protein.
          Length = 129

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 13/28 (46%), Positives = 23/28 (82%)
 Frame = -2

Query: 581 LVELSAANLVSFVFIIWVKRYIIILVIF 498
           L++L  A LVS++F+++ K+YI++ VIF
Sbjct: 86  LLQLEIALLVSYLFVVF-KKYIVVRVIF 112


>AK022991-1|BAB14350.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12929 fis, clone NT2RP2004775. ).
          Length = 129

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 13/28 (46%), Positives = 23/28 (82%)
 Frame = -2

Query: 581 LVELSAANLVSFVFIIWVKRYIIILVIF 498
           L++L  A LVS++F+++ K+YI++ VIF
Sbjct: 86  LLQLEIALLVSYLFVVF-KKYIVVRVIF 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,224,774
Number of Sequences: 237096
Number of extensions: 1831918
Number of successful extensions: 10765
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10761
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)