Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3b02
(713 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1IE82 Cluster: SecF protein; n=1; Candidatus Desulfoco... 36 0.75
UniRef50_A2DA74 Cluster: Putative uncharacterized protein; n=1; ... 36 0.99
UniRef50_A5VES4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q6GPD0 Cluster: MGC80493 protein; n=9; Tetrapoda|Rep: M... 34 4.0
UniRef50_Q3E9C5 Cluster: Uncharacterized protein At5g19170.1; n=... 34 4.0
UniRef50_Q9JAD5 Cluster: Polyprotein; n=68; Flavivirus|Rep: Poly... 33 7.0
UniRef50_Q3JHC8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q46CL8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q9REM8 Cluster: Adhesin P1 precursor; n=18; Mycoplasma|... 33 7.0
UniRef50_A6Q8B1 Cluster: Putative uncharacterized protein; n=2; ... 33 9.2
>UniRef50_A1IE82 Cluster: SecF protein; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: SecF protein -
Candidatus Desulfococcus oleovorans Hxd3
Length = 347
Score = 36.3 bits (80), Expect = 0.75
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +3
Query: 57 LVATKTDSMNLLSYLG--MSLQSEVCLWTLLGLIRNIFDATLFKVNANLKQVWQMSMPDE 230
L+ T ++ + S G SL L T++G N ++ NLK++ + S+PD
Sbjct: 222 LIHDVTITVGIFSITGKEFSLPIIAALLTIIGYSLNDTIIVFDRIRENLKKLSRKSLPDI 281
Query: 231 LSTSVQGVL-RTMI-SGVMLVQCFTVYVYLATYI 326
++TS+ L RT++ SG L+ ++V+ T I
Sbjct: 282 INTSINETLSRTLLTSGTTLIVVAALFVFGGTII 315
>UniRef50_A2DA74 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1119
Score = 35.9 bits (79), Expect = 0.99
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = -2
Query: 208 HTCFRLALTLNSVASKIFRIRPSSVHKQTSDCKLIPKYDSKFILSVFVATK 56
H C + L+ VA ++R RP + + + S + PK+DS F++ + ATK
Sbjct: 144 HVCKLSSSGLSVVAPPVYRYRPPTQNSKQSCYSICPKFDSTFLVLLAEATK 194
>UniRef50_A5VES4 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas wittichii RW1|Rep: Putative uncharacterized
protein - Sphingomonas wittichii RW1
Length = 415
Score = 35.1 bits (77), Expect = 1.7
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = -2
Query: 400 LIAATRSHGKTRAGLSSKNTGYSR--TIYVAR*T-YTVKHWTSITPEIMVRNTPCTDVDS 230
L+AA H + + GYS T+ + R T +TV+ + + + ++ + VD
Sbjct: 23 LVAAKAVHRGLESEFGNAKNGYSSGATVTIKRPTDFTVRSGANASVQDVIEGSTTITVDQ 82
Query: 229 SSGIDICHTCFRLALTLNSVASKIFRIRPSSV 134
G+D T L L++ ++ ++ I+P+ V
Sbjct: 83 QKGVDFAFTSAELTLSIKDLSERV--IKPAMV 112
>UniRef50_Q6GPD0 Cluster: MGC80493 protein; n=9; Tetrapoda|Rep:
MGC80493 protein - Xenopus laevis (African clawed frog)
Length = 1940
Score = 33.9 bits (74), Expect = 4.0
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = -2
Query: 454 NTQVPRPKARLVSSQSSFLIAATRSHGKTRAGLSSKNTGYSRTIYV 317
+T + RPK+ LVSS S+ L++ + +T+A ++S G SR I V
Sbjct: 584 HTSLSRPKSLLVSSPSTKLLSLEEAQARTQAQINSPVVGDSRYIEV 629
>UniRef50_Q3E9C5 Cluster: Uncharacterized protein At5g19170.1; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At5g19170.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 391
Score = 33.9 bits (74), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 638 SKFESIITMGSWHYIRKGFKGCNYFQSVVIA*SNHPHIKTRRYRGKFDNDEFYT 477
S ++ MGS Y KG+ YF ++ +A +NH + + + + D E+YT
Sbjct: 293 SSVNTVAQMGSGEYADKGYGKAAYFCNLKVAENNHTLLPVQDFGVQADYPEYYT 346
>UniRef50_Q9JAD5 Cluster: Polyprotein; n=68; Flavivirus|Rep:
Polyprotein - Rio Bravo virus
Length = 3379
Score = 33.1 bits (72), Expect = 7.0
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +3
Query: 138 LLGLIRNIFDATL-FKVNANLKQVWQMSMPDELS---TSVQGVLRTMISGVM 281
+LG++ L KVN+ L W+M+ P +L+ T++ +LRT+++G++
Sbjct: 30 ILGIMNYASHIALGMKVNSRLTSFWKMTPPGKLAKGITTLMNILRTLLNGIL 81
>UniRef50_Q3JHC8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 595
Score = 33.1 bits (72), Expect = 7.0
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 190 PT*NRYGRCRCRMSCQHRCR 249
PT R GRCRCR C+ RCR
Sbjct: 66 PTEPRRGRCRCRCRCRCRCR 85
>UniRef50_Q46CL8 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina barkeri str. Fusaro|Rep: Putative
uncharacterized protein - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 902
Score = 33.1 bits (72), Expect = 7.0
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 60 VATKTDSMNLLSYLGMSLQSEVCLWTLLGLIRNIFD-ATLFKVNANLKQVWQMSMPDELS 236
+ ++T MNLLS L +SL +E LW + GL ++ AT + LK ++ S L
Sbjct: 131 IPSQTSWMNLLSPLLLSLMTEFILWGVAGLENILYGFATAGLILGALK--YEKSKDIVLL 188
Query: 237 TSVQGVLR-TMISGVMLVQCFTVYVYLATYIV 329
T G++ T GV+ ++L Y++
Sbjct: 189 TCFSGLISITRPEGVIFAIFIYCGIFLRNYVI 220
>UniRef50_Q9REM8 Cluster: Adhesin P1 precursor; n=18;
Mycoplasma|Rep: Adhesin P1 precursor - Mycoplasma
gallisepticum
Length = 1122
Score = 33.1 bits (72), Expect = 7.0
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Frame = -2
Query: 448 QVPRPKARLVSSQSSFLIAATRSHG--KTRAGLSSKNTGYSRTIYVAR*TYTVKHWTSIT 275
++P+PK L SS+SS I R++ T+ L + ++ + + V++ I
Sbjct: 251 KIPKPKTLLDSSESSESINGGRTYANINTQNNLQGVIVKVNENLFNSENPFAVENMAFIK 310
Query: 274 PEIMVRNTPCTDVDSSSGIDICHTC-FRLALTLNSVASKIFRIR--PSSVHKQTSDCKLI 104
P+ MV N P T S+ + + F N+V ++ +R + P + QT+
Sbjct: 311 PKDMVDNYPSTWTQGSANGKMTNVLQFYKHDNPNAVNNRFYRAKYYPKRLETQTT----T 366
Query: 103 PKYDSKF 83
P DS F
Sbjct: 367 PLIDSSF 373
>UniRef50_A6Q8B1 Cluster: Putative uncharacterized protein; n=2;
unclassified Epsilonproteobacteria|Rep: Putative
uncharacterized protein - Sulfurovum sp. (strain
NBC37-1)
Length = 455
Score = 32.7 bits (71), Expect = 9.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -2
Query: 421 VSSQSSFLIAATRSHGKTRAGLSSKNTGYSRTIYVAR*TYTVKHWTSITPEIMVRN-TPC 245
+S S+ L A+ HGK GL + G T+ +Y+ W S E++ RN T
Sbjct: 300 ISDTSTLLAGASILHGKNDQGLDTDVYGADLTVKTTLDSYSSLTWQS---ELLYRNKTTV 356
Query: 244 TDVDSSSG 221
TD + SG
Sbjct: 357 TDKEKQSG 364
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,811,277
Number of Sequences: 1657284
Number of extensions: 13716267
Number of successful extensions: 35339
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35331
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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