Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b02
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        27   0.20 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.46 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.5  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   9.9  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 148 RPSSVHKQTSDCKLIPKY 95
           +PS VHKQT+ C   P+Y
Sbjct: 293 QPSQVHKQTAICFKAPRY 310


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 252 VLRTMISGVMLVQCFTVYVYLATYIVLLYPV 344
           VL  + S V L  CF  Y+Y  T+I   + +
Sbjct: 50  VLTILTSSVTLHVCFNSYMYAFTHIFFFFAI 80


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 160 IFRIRPSSVHKQTSDCKLIPK 98
           IF +RP   HK T + KL  K
Sbjct: 283 IFSLRPGLTHKYTHEIKLHDK 303


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 177 IVWHQRYFVLGPAASTSRLRIVNSYLNTIASSYYQF 70
           ++ HQ  ++  P   +S  RI+N+ L+    S Y+F
Sbjct: 391 VLGHQNPYLALPKTDSSDNRILNNLLDKKPYSTYKF 426


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 177 IVWHQRYFVLGPAASTSRLRIVNSYLNTIASSYYQF 70
           ++ HQ  ++  P   +S  RI+N+ L+    S Y+F
Sbjct: 283 VLGHQNPYLALPKTDSSDNRILNNLLDKKPYSTYKF 318


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 294 FTVYVYLATYIVLLYPVFLEE 356
           F +  YL+ +++L+Y   L+E
Sbjct: 324 FIILFYLSVFVILVYYASLDE 344


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 71  FCSNQMCLMKFLFYFYIT 18
           FC    CL   +FY++I+
Sbjct: 385 FCLMARCLNTLIFYYHIS 402


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 382 FWSPL*GSCSAN*RA*LWASELA 450
           F SP   SC A  +A LW S LA
Sbjct: 385 FKSPYKASCWAQFKAVLWRSILA 407


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 382 FWSPL*GSCSAN*RA*LWASELA 450
           F SP   SC A  +A LW S LA
Sbjct: 385 FKSPYKASCWAQFKAVLWRSILA 407


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = +2

Query: 533 GDYFKLLQRFEXXXXXXXXXXXXXXFPL*LWTRT 634
           GD+ KL   F+               P+ LWT T
Sbjct: 393 GDFIKLWDMFQNESLTRLYKKAGKEIPVILWTST 426


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory
          receptor candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 46 IKHIWLLQKLIV 81
          +KH+W L KL +
Sbjct: 10 LKHVWFLSKLFL 21


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 214 ICHTCFRLALTLNSVASKIFRIRPSSVHKQTSDCKL 107
           ICH C    + L      +F+IR   ++K     K+
Sbjct: 113 ICHICELHTIFLVCNVLTVFKIRYKDLNKALESSKI 148


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 74  SFCSNQMCLMKFLFYFYIT 18
           SF S  +CL  + ++FY++
Sbjct: 74  SFMSRFLCLPFYSYFFYLS 92


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 74 SFCSNQMCLMKFLFYFYIT 18
          SF S  +CL  + ++FY++
Sbjct: 30 SFMSRFLCLPFYSYFFYLS 48


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 182 SQRQPKTGMAD 214
           S+RQPKTG  D
Sbjct: 215 SKRQPKTGRED 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,504
Number of Sequences: 336
Number of extensions: 3768
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)