Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b02
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051813-1|AAK93237.1| 1095|Drosophila melanogaster LD32234p pro...    29   6.3  
AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE...    29   6.3  
AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p pro...    29   8.3  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    29   8.3  

>AY051813-1|AAK93237.1| 1095|Drosophila melanogaster LD32234p protein.
          Length = 1095

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 301  TVKHWTSITPEIMVRNTPCTDVDSSS 224
            T+  W S +P +M+R+TP T   +SS
Sbjct: 1051 TLHRWISKSPRVMLRSTPVTAASASS 1076


>AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE,
            isoform E protein.
          Length = 2497

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 301  TVKHWTSITPEIMVRNTPCTDVDSSS 224
            T+  W S +P +M+R+TP T   +SS
Sbjct: 2453 TLHRWISKSPRVMLRSTPVTAASASS 2478


>AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p
           protein.
          Length = 1358

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 410 EQLPYSGDQKPWQNKSRSFFQKHW 339
           E LP SGD   W  + RSF+   W
Sbjct: 414 ESLPKSGDLIGWNEEMRSFYNDSW 437


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
           protein.
          Length = 1734

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 410 EQLPYSGDQKPWQNKSRSFFQKHW 339
           E LP SGD   W  + RSF+   W
Sbjct: 790 ESLPKSGDLIGWNEEMRSFYNDSW 813


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,155,298
Number of Sequences: 53049
Number of extensions: 638273
Number of successful extensions: 1403
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)