Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3b01
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    27   0.16 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          27   0.16 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   2.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.8  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 595 SRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPISMTSTGSLSPLA 443
           +   I I FQ+      +    ++ T  TSP  A+ SP S +S  S SP A
Sbjct: 125 TERQIKIWFQNRRMKFKKEEKNKVVTPKTSPNEASMSPQSTSSNNSASPKA 175


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 595 SRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPISMTSTGSLSPLA 443
           +   I I FQ+      +    ++ T  TSP  A+ SP S +S  S SP A
Sbjct: 145 TERQIKIWFQNRRMKFKKEEKNKVVTPKTSPNEASMSPQSTSSNNSASPKA 195


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
 Frame = +3

Query: 381  WNYGALPQTWENPN--HVDPDTGARGDNDPVD--VIEIGERVASRGDVYPVKILGTLALI 548
            WN+  L   WE P    VD   G   D       V E+ +    +G +    +  +  +I
Sbjct: 1510 WNFDGLDLDWEYPKCWQVDCKKGPDSDKQAFAAWVTELKQAFKPKGYLLSAAVSPSKTVI 1569

Query: 549  DEG 557
            D G
Sbjct: 1570 DAG 1572



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +3

Query: 381  WNYGALPQTWENPNHVDPDTGARGDND 461
            WN+  L   WE P     D     D+D
Sbjct: 2433 WNFDGLDLDWEYPKCWQVDCNKGPDSD 2459


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 116 VHPYLSF*CGSRIN*TSYTCRFFNSAQSSCYRPANRNS 3
           + P L    GS  + T  +  + NSA SS + PA+ +S
Sbjct: 189 IKPQLHVSTGSTSSPTIASATYTNSANSSIWSPASIDS 226


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -1

Query: 559 SPSSMRASVPRIFTG*TSPRLATRSPISMTSTGSLSPLA 443
           SPSS  +S+P   T  ++P  ++RS   MTS  S+   A
Sbjct: 76  SPSSTPSSLPTQRTSTSNPTYSSRS--VMTSCSSVPTTA 112


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 144 CKVILFLLRCTSLLEFLVWQSN*LNK 67
           C   L+ + CT+     VW  N L+K
Sbjct: 220 CLCSLWFINCTAKGRVAVWMCNNLHK 245


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 144 CKVILFLLRCTSLLEFLVWQSN*LNK 67
           C   L+ + CT+     VW  N L+K
Sbjct: 220 CLCSLWFINCTAKGRVAVWMCNNLHK 245


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 426 VDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDE 554
           +DP     GDN P D  +       + D+ P+  +  + L+DE
Sbjct: 547 IDPQQFCNGDNRPAD-CQQNCMCTHKVDI-PLNAIVEIVLVDE 587


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,844
Number of Sequences: 336
Number of extensions: 3550
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)