Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3b01
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical pr... 325 2e-89
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 325 2e-89
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 325 2e-89
Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical pr... 325 2e-89
AC024810-11|AAK68516.2| 165|Caenorhabditis elegans Hypothetical... 32 0.37
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 30 1.5
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 30 1.5
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.4
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 4.5
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 4.5
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 6.0
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 28 6.0
>Z68882-7|CAD89727.1| 292|Caenorhabditis elegans Hypothetical
protein C47E12.4d protein.
Length = 292
Score = 325 bits (799), Expect = 2e-89
Identities = 142/208 (68%), Positives = 173/208 (83%)
Frame = +3
Query: 111 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 290
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 10 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 69
Query: 291 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 470
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 70 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 129
Query: 471 VIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPG 650
VIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D NA+KLND+ DVE ++PG
Sbjct: 130 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPG 189
Query: 651 LLRATVEWFRLYKVPDGKPVNKFAFDGE 734
LL A+VEWFR YK+P GKP N+FAF+GE
Sbjct: 190 LLAASVEWFRNYKIPAGKPANEFAFNGE 217
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 325 bits (799), Expect = 2e-89
Identities = 142/208 (68%), Positives = 173/208 (83%)
Frame = +3
Query: 111 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 290
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 124 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 183
Query: 291 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 470
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 184 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 243
Query: 471 VIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPG 650
VIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D NA+KLND+ DVE ++PG
Sbjct: 244 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPG 303
Query: 651 LLRATVEWFRLYKVPDGKPVNKFAFDGE 734
LL A+VEWFR YK+P GKP N+FAF+GE
Sbjct: 304 LLAASVEWFRNYKIPAGKPANEFAFNGE 331
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 325 bits (799), Expect = 2e-89
Identities = 142/208 (68%), Positives = 173/208 (83%)
Frame = +3
Query: 111 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 290
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 125 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 184
Query: 291 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 470
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 185 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 244
Query: 471 VIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPG 650
VIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D NA+KLND+ DVE ++PG
Sbjct: 245 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPG 304
Query: 651 LLRATVEWFRLYKVPDGKPVNKFAFDGE 734
LL A+VEWFR YK+P GKP N+FAF+GE
Sbjct: 305 LLAASVEWFRNYKIPAGKPANEFAFNGE 332
>Z68882-4|CAD89728.1| 338|Caenorhabditis elegans Hypothetical
protein C47E12.4a protein.
Length = 338
Score = 325 bits (799), Expect = 2e-89
Identities = 142/208 (68%), Positives = 173/208 (83%)
Frame = +3
Query: 111 MYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEIS 290
+Y ERGS Y+ DYRV+ K G +SP HDIPL+A+K +R+ NM+VE+PRWTNAKME++
Sbjct: 56 VYEAVERGSLYSLDYRVYIKGPQGIVSPWHDIPLFANKDKRVYNMIVEIPRWTNAKMEMA 115
Query: 291 LGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVD 470
E +PIKQD KKG RFV+N+FPH+GYIWNYGALPQTWE+PNHV PDTGA+GDNDP+D
Sbjct: 116 TKEPFSPIKQDEKKGVARFVHNIFPHKGYIWNYGALPQTWEDPNHVVPDTGAKGDNDPID 175
Query: 471 VIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPNAEKLNDVQDVETLFPG 650
VIE+G +VA RG V VK+LGTLALIDEGETDWKL+AID D NA+KLND+ DVE ++PG
Sbjct: 176 VIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKLNDIDDVEKVYPG 235
Query: 651 LLRATVEWFRLYKVPDGKPVNKFAFDGE 734
LL A+VEWFR YK+P GKP N+FAF+GE
Sbjct: 236 LLAASVEWFRNYKIPAGKPANEFAFNGE 263
>AC024810-11|AAK68516.2| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.17 protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = -1
Query: 700 PSGTL*SLNHST---VAR-RRPGNNVSTSCTSFNFSAFGSRESIAISFQSVSPSSM 545
PS TL SL++++ VAR RP ++ST CT++NF GS E +I + + +P ++
Sbjct: 98 PSVTLQSLDYNSNTLVARFARPVGSLST-CTTWNFVTEGSIEDGSIGYHNAAPHTV 152
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 492 VASRGDVYPVKILGTLALIDEGETDWKLI-AIDSRDPNAEKLNDVQDVETLFPGLLRATV 668
+ + + Y VKI G A E DW L+ A +DP+A+K D + E +
Sbjct: 170 ILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPE 229
Query: 669 EWFRLYKVPD 698
+W + +PD
Sbjct: 230 DWEKPEHIPD 239
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 492 VASRGDVYPVKILGTLALIDEGETDWKLI-AIDSRDPNAEKLNDVQDVETLFPGLLRATV 668
+ + + Y VKI G A E DW L+ A +DP+A+K D + E +
Sbjct: 170 ILNSDNTYEVKIDGESAQTGSLEEDWDLLPAKKIKDPDAKKPEDWDEREYIDDAEDAKPE 229
Query: 669 EWFRLYKVPD 698
+W + +PD
Sbjct: 230 DWEKPEHIPD 239
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = -1
Query: 640 NVSTSCTSFNFSAFGSRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPISMTSTG 461
N S S + A S S + S+SPS ++S G TSP ++T S MTS G
Sbjct: 1095 NPSQSTSPSTSGATSSPGSSGTTLTSISPSPSQSSTIGSSQGSTSPVVSTTSG-DMTSQG 1153
Query: 460 SLSPLAPVSGST 425
S + + +GST
Sbjct: 1154 S-TQIPGSTGST 1164
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = -1
Query: 670 STVARRRPGNNVSTSCTSFNFS-AFGSRESIAISFQSVSPSSMRASVPRIFTG*TSPRLA 494
S+++ + P ++ STS + S A S S + S+SPS +S G TSP ++
Sbjct: 984 SSMSTQTPQSSQSTSPVESSTSGATSSSGSPGTTLTSISPSPSPSSTIGSSQGSTSPVVS 1043
Query: 493 TRSPISMTSTGS----LSPLAPVSGST*LGFSQVCG 398
T S S + GS ++ + VSGS G + G
Sbjct: 1044 TISQGSTETPGSTGSTVTKPSTVSGSASSGSTATMG 1079
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/98 (29%), Positives = 45/98 (45%)
Frame = -1
Query: 733 SPSNANLFTGLPSGTL*SLNHSTVARRRPGNNVSTSCTSFNFSAFGSRESIAISFQSVSP 554
SP++ + PS + S ++S + + S S TS ++S S S + S S SP
Sbjct: 1613 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--SSPSYSPSSPSYSP 1670
Query: 553 SSMRASVPRIFTG*TSPRLATRSPISMTSTGSLSPLAP 440
SS R S TSP + SP ++ + SP +P
Sbjct: 1671 SSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSP 1708
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/98 (29%), Positives = 45/98 (45%)
Frame = -1
Query: 733 SPSNANLFTGLPSGTL*SLNHSTVARRRPGNNVSTSCTSFNFSAFGSRESIAISFQSVSP 554
SP++ + PS + S ++S + + S S TS ++S S S + S S SP
Sbjct: 1620 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP--SSPSYSPSSPSYSP 1677
Query: 553 SSMRASVPRIFTG*TSPRLATRSPISMTSTGSLSPLAP 440
SS R S TSP + SP ++ + SP +P
Sbjct: 1678 SSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSP 1715
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 354 NVFPHRGYIWNYGALPQTWE-NPNHVDPD 437
N +P GYIWNY Q WE +P++V P+
Sbjct: 401 NAYP--GYIWNYET--QEWEYDPSYVAPE 425
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -1
Query: 637 VSTSCTSFNFSAFGSRESIAISFQSVSPSSMRASVPRIFTG*TSPRLATRSPISMTSTGS 458
V T+CT +A + +I+ + S S ++ PRI T + T P+S T S
Sbjct: 100 VWTNCTETTSTA-STEFTISSTSLKTSTSDSTSTEPRISTTTDTKDTTTEDPVSSTDQSS 158
Query: 457 LSP 449
SP
Sbjct: 159 TSP 161
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 6.0
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = -1
Query: 682 SLNHSTVARRRPGNNVST---SCTSFNFSAFGSRESIAISFQSVSPSSMRA---SVPRIF 521
+++ ST + PG+ ST S + + GS S ++S S+M S
Sbjct: 915 TMSASTGSTDTPGSTESTITGSTVTGESTVSGSTGSTITEGSTISESTMTTVGVSTGSTI 974
Query: 520 TG*TSPRLATRSPISMTSTGSLSPLAPVSGST 425
TG ++ +TRS ++ ST S S + VSGST
Sbjct: 975 TGESTVSGSTRSTVTGESTVSGSTESTVSGST 1006
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 275 ENGDQPRGGPQSYQAGRKERQPSVREQRLPSSRLHLELR 391
+N D GGP + + GRK++ S E S LH EL+
Sbjct: 83 KNSDGGAGGPPA-KRGRKKKAKSESEDEAESDHLHDELK 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,137
Number of Sequences: 27780
Number of extensions: 342092
Number of successful extensions: 964
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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