Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a22
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.9  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 256 LSQSMGALELIESPHFWIIVGGIV*ILT--FAFAHCGFVTVASFIDVFSTVFF 104
           L    GA+ ++    F II+G ++   T  F+F +C + +  +   V++T+FF
Sbjct: 242 LCDMCGAINMLFG--FPIIIGCLIQFNTIVFSFCYCYYNSKMTKDGVYNTLFF 292


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 371 KKKIGMYYTTPVYQFRMKCHLCDNHFEIKTDPGNL 475
           K  + M+Y T   +   KC +C   F   T  GNL
Sbjct: 147 KSALQMHYRTHTGERPFKCKICGRAF---TTKGNL 178


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 557 KEAQKKLFDDAMFRLEHKKGDEDLSKTDKP 646
           K+ ++ + D+A  R      D ++   DKP
Sbjct: 45  KQTKQSVLDEARLRANDSSVDPEIDIEDKP 74


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 167  RKGQNLYYPPDYDP 208
            RKG   Y P D DP
Sbjct: 1411 RKGLGKYLPEDIDP 1424


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,394
Number of Sequences: 336
Number of extensions: 4295
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)