Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3a22
(660 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070525-1|AAL47996.1| 316|Drosophila melanogaster GH26994p pro... 312 3e-85
AE013599-2785|AAF57624.1| 316|Drosophila melanogaster CG15084-P... 312 3e-85
AY118949-1|AAM50809.1| 333|Drosophila melanogaster LD32459p pro... 70 3e-12
AE013599-2203|AAF58052.2| 333|Drosophila melanogaster CG8435-PA... 70 3e-12
AY069433-1|AAL39578.1| 654|Drosophila melanogaster LD14121p pro... 33 0.26
AE014297-4325|AAF56860.1| 654|Drosophila melanogaster CG11881-P... 33 0.26
AY071568-1|AAL49190.1| 499|Drosophila melanogaster RE63174p pro... 28 9.8
AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin h... 28 9.8
AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington d... 28 9.8
AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington d... 28 9.8
AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA... 28 9.8
AE014296-131|AAF47409.3| 499|Drosophila melanogaster CG13895-PA... 28 9.8
>AY070525-1|AAL47996.1| 316|Drosophila melanogaster GH26994p
protein.
Length = 316
Score = 312 bits (766), Expect = 3e-85
Identities = 133/165 (80%), Positives = 148/165 (89%)
Frame = +2
Query: 158 MGERKGQNLYYPPDYDPKVGGLNKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCNN 337
MGERKGQN YYPPDYDPK GGLNKFQGTHALRERARK+H+GI+IIRFEMPYNIWCDGC N
Sbjct: 1 MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60
Query: 338 HIGMGVRYNAEKKKIGMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARRQENR 517
HIGMGVRYNAEK K+GMYYTTPV++FRMKCHLCDNHFEI+TDPGNLDYVI+SGARRQENR
Sbjct: 61 HIGMGVRYNAEKTKVGMYYTTPVFKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQENR 120
Query: 518 WDPTENGQIVPETKEAQKKLFDDAMFRLEHKKGDEDLSKTDKPRL 652
WDP +N Q+VPETKE QK+LFDDAM++LEH+ D +P L
Sbjct: 121 WDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGADARPVL 165
>AE013599-2785|AAF57624.1| 316|Drosophila melanogaster CG15084-PA
protein.
Length = 316
Score = 312 bits (766), Expect = 3e-85
Identities = 133/165 (80%), Positives = 148/165 (89%)
Frame = +2
Query: 158 MGERKGQNLYYPPDYDPKVGGLNKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCNN 337
MGERKGQN YYPPDYDPK GGLNKFQGTHALRERARK+H+GI+IIRFEMPYNIWCDGC N
Sbjct: 1 MGERKGQNKYYPPDYDPKKGGLNKFQGTHALRERARKIHLGIIIIRFEMPYNIWCDGCKN 60
Query: 338 HIGMGVRYNAEKKKIGMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARRQENR 517
HIGMGVRYNAEK K+GMYYTTPV++FRMKCHLCDNHFEI+TDPGNLDYVI+SGARRQENR
Sbjct: 61 HIGMGVRYNAEKTKVGMYYTTPVFKFRMKCHLCDNHFEIQTDPGNLDYVILSGARRQENR 120
Query: 518 WDPTENGQIVPETKEAQKKLFDDAMFRLEHKKGDEDLSKTDKPRL 652
WDP +N Q+VPETKE QK+LFDDAM++LEH+ D +P L
Sbjct: 121 WDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGADARPVL 165
>AY118949-1|AAM50809.1| 333|Drosophila melanogaster LD32459p
protein.
Length = 333
Score = 69.7 bits (163), Expect = 3e-12
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +2
Query: 158 MGERKGQNLYYPPDYDPKVGGLNKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCNN 337
M ERK N YYPPD+DP +K + R +R P+N+ C C
Sbjct: 1 MSERKVLNKYYPPDFDP-----SKIPRMKLAKNRQ-------YTVRLMAPFNMRCKTCGE 48
Query: 338 HIGMGVRYNAEKKKI--GMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARR 505
+I G ++NA K+ + Y +Y+F +KC C KTDP N DY I +GA R
Sbjct: 49 YIYKGKKFNARKEDVENETYLGIRIYRFYIKCTRCLQEISFKTDPQNTDYEIEAGATR 106
>AE013599-2203|AAF58052.2| 333|Drosophila melanogaster CG8435-PA
protein.
Length = 333
Score = 69.7 bits (163), Expect = 3e-12
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +2
Query: 158 MGERKGQNLYYPPDYDPKVGGLNKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCNN 337
M ERK N YYPPD+DP +K + R +R P+N+ C C
Sbjct: 1 MSERKVLNKYYPPDFDP-----SKIPRMKLAKNRQ-------YTVRLMAPFNMRCKTCGE 48
Query: 338 HIGMGVRYNAEKKKI--GMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARR 505
+I G ++NA K+ + Y +Y+F +KC C KTDP N DY I +GA R
Sbjct: 49 YIYKGKKFNARKEDVENETYLGIRIYRFYIKCTRCLQEISFKTDPQNTDYEIEAGATR 106
>AY069433-1|AAL39578.1| 654|Drosophila melanogaster LD14121p
protein.
Length = 654
Score = 33.5 bits (73), Expect = 0.26
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -3
Query: 346 ANMVIAPVTPDVVRHFKANDKDTHVELSGTLSQS 245
+N ++AP P R KA D+ T ++L+GTL++S
Sbjct: 428 SNSLLAPAPPRSARKLKALDQSTGIDLNGTLNRS 461
>AE014297-4325|AAF56860.1| 654|Drosophila melanogaster CG11881-PA
protein.
Length = 654
Score = 33.5 bits (73), Expect = 0.26
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -3
Query: 346 ANMVIAPVTPDVVRHFKANDKDTHVELSGTLSQS 245
+N ++AP P R KA D+ T ++L+GTL++S
Sbjct: 428 SNSLLAPAPPRSARKLKALDQSTGIDLNGTLNRS 461
>AY071568-1|AAL49190.1| 499|Drosophila melanogaster RE63174p
protein.
Length = 499
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 599 LEHKKGDEDLSKTDKPRL 652
L+HKK E+LS++DKP +
Sbjct: 322 LDHKKSQEELSQSDKPEV 339
>AF177386-1|AAD51369.1| 3584|Drosophila melanogaster huntingtin
homolog protein.
Length = 3584
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 491 SGARRQENRWDPTENGQIVPETKEAQKK---LFDDAMFRLE--HKKGDED 625
SGAR+Q+++W P + + ++A+ + +A F E H GD+D
Sbjct: 1289 SGARKQDSKWPPMDASSVCHSVRDAEGEDIVCTYEAQFLAELLHLLGDDD 1338
>AF147779-1|AAF03256.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 491 SGARRQENRWDPTENGQIVPETKEAQKK---LFDDAMFRLE--HKKGDED 625
SGAR+Q+++W P + + ++A+ + +A F E H GD+D
Sbjct: 1289 SGARKQDSKWPPMDASSVCHSVRDAEGEDIVCTYEAQFLAELLHLLGDDD 1338
>AF146362-1|AAF03255.1| 3583|Drosophila melanogaster Huntington
disease protein homolog protein.
Length = 3583
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 491 SGARRQENRWDPTENGQIVPETKEAQKK---LFDDAMFRLE--HKKGDED 625
SGAR+Q+++W P + + ++A+ + +A F E H GD+D
Sbjct: 1289 SGARKQDSKWPPMDASSVCHSVRDAEGEDIVCTYEAQFLAELLHLLGDDD 1338
>AE014297-4258|AAF56808.1| 3583|Drosophila melanogaster CG9995-PA
protein.
Length = 3583
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +2
Query: 491 SGARRQENRWDPTENGQIVPETKEAQKK---LFDDAMFRLE--HKKGDED 625
SGAR+Q+++W P + + ++A+ + +A F E H GD+D
Sbjct: 1289 SGARKQDSKWPPMDASSVCHSVRDAEGEDIVCTYEAQFLAELLHLLGDDD 1338
>AE014296-131|AAF47409.3| 499|Drosophila melanogaster CG13895-PA
protein.
Length = 499
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 599 LEHKKGDEDLSKTDKPRL 652
L+HKK E+LS++DKP +
Sbjct: 322 LDHKKSQEELSQSDKPEV 339
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,898,860
Number of Sequences: 53049
Number of extensions: 734092
Number of successful extensions: 2431
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2429
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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