Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a22
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47358-7|CAA87435.1|  369|Caenorhabditis elegans Hypothetical pr...   234   5e-62
U00033-9|AAC48293.1|  323|Caenorhabditis elegans Hypothetical pr...    49   3e-06
U28971-4|AAK68668.1|  628|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF099920-4|AAK29844.2|  363|Caenorhabditis elegans Serpentine re...    27   8.9  

>Z47358-7|CAA87435.1|  369|Caenorhabditis elegans Hypothetical
           protein ZK1307.9 protein.
          Length = 369

 Score =  234 bits (572), Expect = 5e-62
 Identities = 103/168 (61%), Positives = 131/168 (77%), Gaps = 1/168 (0%)
 Frame = +2

Query: 158 MGERKGQNLYYPPDYDPKVG-GLNKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCN 334
           MGERKGQN YYPPD++ K    LN + GTHALRERA+K+  GIL+IRFEMP+NIWC GC+
Sbjct: 1   MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCH 60

Query: 335 NHIGMGVRYNAEKKKIGMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARRQEN 514
           NH+GMGVRYNAEKKKIGMYYTTP+++FRMKCHLCDN++ I+TDP N DY +V G  RQE 
Sbjct: 61  NHVGMGVRYNAEKKKIGMYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQEL 120

Query: 515 RWDPTENGQIVPETKEAQKKLFDDAMFRLEHKKGDEDLSKTDKPRLGR 658
           R+DPT+  QI    +   +KL  DAMF+ EH+  D+D + T++ R+ +
Sbjct: 121 RFDPTDIAQIGAVDRGFTQKLAADAMFKKEHEAEDKDKAATEEGRVDK 168


>U00033-9|AAC48293.1|  323|Caenorhabditis elegans Hypothetical
           protein F37C12.1 protein.
          Length = 323

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
 Frame = +2

Query: 164 ERKGQNLYYPPDYDPKVGGLNKFQGTHALRERARKLHMGILIIRFEMPYNIWCDGCNNHI 343
           ERK    YYPPD+DP     +K       + R         + R   P+N+ C+ C+ +I
Sbjct: 5   ERKVFQKYYPPDFDP-----SKIPRAKGQKNRQ-------FVQRVMTPFNMQCNTCHEYI 52

Query: 344 GMGVRYNAEKKKI--GMYYTTPVYQFRMKCHLCDNHFEIKTDPGNLDYVIVSGARR 505
             G ++N +++      Y    +++F  +C  C      KTD  N DY    GA R
Sbjct: 53  YKGKKFNMKRETAEGETYLGLKLFRFYFRCPNCLAEITFKTDLENCDYQNEHGATR 108


>U28971-4|AAK68668.1|  628|Caenorhabditis elegans Hypothetical
           protein B0244.10 protein.
          Length = 628

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 157 CGFV-TVASFIDVFSTVFF*RSTKLTRIHGLLNFY 56
           CG +  VAS IDVF  +    ST +  I G+LNFY
Sbjct: 28  CGLIRNVASSIDVFHWLDVYISTTIFVISGILNFY 62


>AF099920-4|AAK29844.2|  363|Caenorhabditis elegans Serpentine
           receptor, class w protein95 protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -3

Query: 250 QSMGALELIESPHFWIIV-GGIV*ILTFAFAHCGFVTVASFIDVFSTVFF 104
           ++ G +  I +  F I V  GIV +L F +   G+  +A+ +  FS+ FF
Sbjct: 272 RTTGLVVFITASTFLIEVPNGIVRVLQFGYTDLGYWRMATSVAQFSSAFF 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,452,400
Number of Sequences: 27780
Number of extensions: 381130
Number of successful extensions: 1053
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)