Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a17
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   0.89 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = -3

Query: 100 KRILLLDQILFMFPLDPVDD 41
           K++LLL QI+ +FPL+ +++
Sbjct: 29  KKVLLLSQIVGVFPLNHLNE 48


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 447 TIMLKDGSGTTMISFFFVCKRITSTASKGSI 355
           T+ + D     M++FF V  RI    SKG +
Sbjct: 58  TVAITDKIANFMLTFFNVSLRIILVFSKGKV 88


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 349 DASLYHNTESVQSQGVVRGTGCIHI 275
           D SLY++T +  S+ +V  +G +HI
Sbjct: 163 DGSLYNHTANYDSKYLVLPSGELHI 187


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 302  YALALHRFGVMVQTCVKEMDPFD 370
            +A+ +HRFG   Q   K    FD
Sbjct: 1300 FAMMIHRFGTFSQIITKTQLDFD 1322


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 302  YALALHRFGVMVQTCVKEMDPFD 370
            +A+ +HRFG   Q   K    FD
Sbjct: 1300 FAMMIHRFGTFSQIITKTQLDFD 1322


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 489 FSEFFLIFCLACCNTIMLKDGSGTTMISFFFV 394
           F+     FC    N+ M KDG   T+    +V
Sbjct: 265 FNTIVFSFCYCYYNSKMTKDGVYNTLFFIVYV 296


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 401 FSYANALLVLRRKDPFP 351
           FSYA+ LL +RR+   P
Sbjct: 237 FSYASILLEIRRRTRNP 253


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 123 SGLCYMKMETNGSLIY 170
           SGL ++ +   GSL+Y
Sbjct: 421 SGLAWLYLNNEGSLVY 436


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 401 FSYANALLVLRRKDPFP 351
           FSYA+ LL +RR+   P
Sbjct: 237 FSYASILLEIRRRTRNP 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,063
Number of Sequences: 336
Number of extensions: 3189
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)