Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a15
         (729 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235...    28   6.6  
04_03_0053 - 10286076-10286516,10286560-10287586,10287756-102880...    28   6.6  
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665...    28   8.7  

>08_02_0499 -
           17820615-17822516,17823224-17823373,17823491-17823568,
           17823948-17824061,17824145-17824297,17826928-17827071,
           17827162-17827516,17828574-17828741,17829522-17829751,
           17829916-17830049,17830686-17830749
          Length = 1163

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +3

Query: 135 TKQYFFDTHHGLQTACNIRDRLQQNGREMLFLPAEQCSNSHFRSEMLLENYSKKPSNCFC 314
           +K +  +T H LQ  CN  + LQ+N +           +   +  + L+  SK  ++   
Sbjct: 549 SKLFPHNTRHMLQQYCNSENSLQENNKRRRTENYIVSQDDSPKDAITLKQLSKSDTSLLV 608

Query: 315 *KLIGLFQVQK 347
            K++GL QV K
Sbjct: 609 DKVVGL-QVDK 618


>04_03_0053 -
           10286076-10286516,10286560-10287586,10287756-10288096,
           10288198-10288248
          Length = 619

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 640 GTEMTHHRCETFGNYHSIS 696
           G E TH RC T+G Y S S
Sbjct: 262 GEERTHRRCMTYGKYASTS 280


>07_02_0028 +
           11964941-11964991,11965259-11966101,11966249-11966560,
           11966640-11967073,11967500-11967941
          Length = 693

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 646 EMTHHRCETFGNYHSIS 696
           E THHRC ++G Y S S
Sbjct: 254 ERTHHRCMSYGEYASAS 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,806
Number of Sequences: 37544
Number of extensions: 283172
Number of successful extensions: 530
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)