Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3a13
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99496-4|CAM28258.1| 576|Homo sapiens chromosome 6 open reading... 31 5.6
Z99496-1|CAI21605.1| 805|Homo sapiens chromosome 6 open reading... 31 5.6
BC043366-1|AAH43366.1| 694|Homo sapiens growth arrest-specific ... 31 5.6
AL589993-1|CAI16048.1| 805|Homo sapiens chromosome 6 open readi... 31 5.6
AL390069-4|CAM19612.1| 576|Homo sapiens chromosome 6 open readi... 31 5.6
AL390069-1|CAI14134.1| 805|Homo sapiens chromosome 6 open readi... 31 5.6
AF308284-1|AAG48252.1| 546|Homo sapiens serologically defined b... 31 5.6
BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4 p... 30 9.8
BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein. 30 9.8
AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4 p... 30 9.8
AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding prote... 30 9.8
AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding prote... 30 9.8
AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB... 30 9.8
>Z99496-4|CAM28258.1| 576|Homo sapiens chromosome 6 open reading
frame 204 protein.
Length = 576
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 305 KLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTE 484
K ++ + KE +IETL+K+ +L + V+ S+ Q+LE E K + + TE
Sbjct: 495 KKCQKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILE--EKNKNLQEALIDTE 552
Query: 485 VSVTE 499
+ E
Sbjct: 553 KKLEE 557
>Z99496-1|CAI21605.1| 805|Homo sapiens chromosome 6 open reading
frame 204 protein.
Length = 805
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 305 KLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTE 484
K ++ + KE +IETL+K+ +L + V+ S+ Q+LE E K + + TE
Sbjct: 492 KKCQKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILE--EKNKNLQEALIDTE 549
Query: 485 VSVTE 499
+ E
Sbjct: 550 KKLEE 554
>BC043366-1|AAH43366.1| 694|Homo sapiens growth arrest-specific 2
like 3 protein.
Length = 694
Score = 30.7 bits (66), Expect = 5.6
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = +2
Query: 317 RTTPPKKESPMK-IETLQKFAPELVP-KNTVEIVS---IPNQVLEIVEAEKAVDNVISMT 481
RT P ESP K I + +++P +N+ ++ +PN+ + + N IS
Sbjct: 423 RTAPCISESPRKCISSPNTPKAKVIPAQNSADLPESTLLPNKCSGKTQPKYLKHNHISSR 482
Query: 482 EVSVTETIA-KNSSFKIPKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDIAAEL 649
+ +V+ A NSS K PK+P N V + K S A M + IA L
Sbjct: 483 DNAVSHLAAHSNSSSKCPKLPKANIPV------RPKPSFQSSAKMTKTSSKTIATGL 533
>AL589993-1|CAI16048.1| 805|Homo sapiens chromosome 6 open reading
frame 204 protein.
Length = 805
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 305 KLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTE 484
K ++ + KE +IETL+K+ +L + V+ S+ Q+LE E K + + TE
Sbjct: 492 KKCQKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILE--EKNKNLQEALIDTE 549
Query: 485 VSVTE 499
+ E
Sbjct: 550 KKLEE 554
>AL390069-4|CAM19612.1| 576|Homo sapiens chromosome 6 open reading
frame 204 protein.
Length = 576
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 305 KLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTE 484
K ++ + KE +IETL+K+ +L + V+ S+ Q+LE E K + + TE
Sbjct: 495 KKCQKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILE--EKNKNLQEALIDTE 552
Query: 485 VSVTE 499
+ E
Sbjct: 553 KKLEE 557
>AL390069-1|CAI14134.1| 805|Homo sapiens chromosome 6 open reading
frame 204 protein.
Length = 805
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 305 KLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTE 484
K ++ + KE +IETL+K+ +L + V+ S+ Q+LE E K + + TE
Sbjct: 492 KKCQKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILE--EKNKNLQEALIDTE 549
Query: 485 VSVTE 499
+ E
Sbjct: 550 KKLEE 554
>AF308284-1|AAG48252.1| 546|Homo sapiens serologically defined
breast cancer antigen NY-BR-15 protein.
Length = 546
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 305 KLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTE 484
K ++ + KE +IETL+K+ +L + V+ S+ Q+LE E K + + TE
Sbjct: 233 KKCQKESEQNKEKQRRIETLEKYLADLPTLDDVQSQSLQLQILE--EKNKNLQEALIDTE 290
Query: 485 VSVTE 499
+ E
Sbjct: 291 KKLEE 295
>BC038975-1|AAH38975.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 29.9 bits (64), Expect = 9.8
Identities = 23/109 (21%), Positives = 48/109 (44%)
Frame = +2
Query: 350 KIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKI 529
K+E L+K + VS ++ E++E + + ++ + E+ KN+
Sbjct: 449 KLEELEKEEELRTAAGEYDSVS-ESEDEEMLEIRQLAKQIREKKKLKILESKEKNTQG-- 505
Query: 530 PKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDIAAELTKHVGTLRK 676
P+MP +V + +EK +SL D + + + A ++ + RK
Sbjct: 506 PRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRK 554
>BC033784-1|AAH33784.1| 632|Homo sapiens GTPBP4 protein protein.
Length = 632
Score = 29.9 bits (64), Expect = 9.8
Identities = 23/109 (21%), Positives = 48/109 (44%)
Frame = +2
Query: 350 KIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKI 529
K+E L+K + VS ++ E++E + + ++ + E+ KN+
Sbjct: 447 KLEELEKEEELRTAAGEYDSVS-ESEDEEMLEIRQLAKQIREKKKLKILESKEKNTQG-- 503
Query: 530 PKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDIAAELTKHVGTLRK 676
P+MP +V + +EK +SL D + + + A ++ + RK
Sbjct: 504 PRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRK 552
>AL359878-5|CAI13664.1| 634|Homo sapiens GTP binding protein 4
protein.
Length = 634
Score = 29.9 bits (64), Expect = 9.8
Identities = 23/109 (21%), Positives = 48/109 (44%)
Frame = +2
Query: 350 KIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKI 529
K+E L+K + VS ++ E++E + + ++ + E+ KN+
Sbjct: 449 KLEELEKEEELRTAAGEYDSVS-ESEDEEMLEIRQLAKQIREKKKLKILESKEKNTQG-- 505
Query: 530 PKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDIAAELTKHVGTLRK 676
P+MP +V + +EK +SL D + + + A ++ + RK
Sbjct: 506 PRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRK 554
>AK222861-1|BAD96581.1| 634|Homo sapiens G protein-binding protein
CRFG variant protein.
Length = 634
Score = 29.9 bits (64), Expect = 9.8
Identities = 23/109 (21%), Positives = 48/109 (44%)
Frame = +2
Query: 350 KIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKI 529
K+E L+K + VS ++ E++E + + ++ + E+ KN+
Sbjct: 449 KLEELEKEEELRTAAGEYDSVS-ESEDEEMLEIRQLAKQIREKKKLKILESKEKNTQG-- 505
Query: 530 PKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDIAAELTKHVGTLRK 676
P+MP +V + +EK +SL D + + + A ++ + RK
Sbjct: 506 PRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRK 554
>AF325353-1|AAK13444.1| 634|Homo sapiens G protein-binding protein
CRFG protein.
Length = 634
Score = 29.9 bits (64), Expect = 9.8
Identities = 23/109 (21%), Positives = 48/109 (44%)
Frame = +2
Query: 350 KIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKI 529
K+E L+K + VS ++ E++E + + ++ + E+ KN+
Sbjct: 449 KLEELEKEEELRTAAGEYDSVS-ESEDEEMLEIRQLAKQIREKKKLKILESKEKNTQG-- 505
Query: 530 PKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDIAAELTKHVGTLRK 676
P+MP +V + +EK +SL D + + + A ++ + RK
Sbjct: 506 PRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRK 554
>AF120334-1|AAD09830.1| 633|Homo sapiens GTP-binding protein NGB
protein.
Length = 633
Score = 29.9 bits (64), Expect = 9.8
Identities = 23/109 (21%), Positives = 48/109 (44%)
Frame = +2
Query: 350 KIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKI 529
K+E L+K + VS ++ E++E + + ++ + E+ KN+
Sbjct: 449 KLEELEKEEELRTAAGEYDSVS-ESEDEEMLEIRQLAKQIREKKKLKILESKEKNTQG-- 505
Query: 530 PKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDIAAELTKHVGTLRK 676
P+MP +V + +EK +SL D + + + A ++ + RK
Sbjct: 506 PRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRK 554
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,968,386
Number of Sequences: 237096
Number of extensions: 1454577
Number of successful extensions: 5170
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5167
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -