Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3a13
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical pr... 31 0.84
U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF039046-13|AAB94213.1| 551|Caenorhabditis elegans Hypothetical... 31 0.84
Z92831-5|CAJ58498.1| 247|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL031627-10|CAA20949.1| 301|Caenorhabditis elegans Hypothetical... 30 1.9
AC025726-27|AAK73932.2| 383|Caenorhabditis elegans Hypothetical... 30 1.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 1.9
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z79755-3|CAB02108.1| 355|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 29 3.4
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z70311-12|CAA94381.3| 418|Caenorhabditis elegans Hypothetical p... 29 4.5
Z70306-7|CAA94327.3| 418|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF003740-2|AAM15562.2| 330|Caenorhabditis elegans Hypothetical ... 28 5.9
Z93397-5|CAD89745.1| 375|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 7.9
U23172-3|AAC46526.1| 547|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 28 7.9
AF098995-11|AAC67488.2| 415|Caenorhabditis elegans Hypothetical... 28 7.9
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 28 7.9
>U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical
protein F26F12.3b protein.
Length = 805
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 413 SIPNQVLE-IVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVNSEVLKNAIEKRKK 589
S+P Q++E ++ A+ +DNV+S+TE+ I ++ + L V K+ +
Sbjct: 26 SMPVQIVERVLTAKDTIDNVVSLTEIDKNGEIVRHETAGGKGANLQTLLVTGTTNTKKTR 85
Query: 590 SLMKDASMNTNTDHDIAAELT 652
K++ +T ++ +E++
Sbjct: 86 KARKESEASTTSECSQTSEVS 106
>U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical
protein F26F12.3a protein.
Length = 890
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 413 SIPNQVLE-IVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVNSEVLKNAIEKRKK 589
S+P Q++E ++ A+ +DNV+S+TE+ I ++ + L V K+ +
Sbjct: 111 SMPVQIVERVLTAKDTIDNVVSLTEIDKNGEIVRHETAGGKGANLQTLLVTGTTNTKKTR 170
Query: 590 SLMKDASMNTNTDHDIAAELT 652
K++ +T ++ +E++
Sbjct: 171 KARKESEASTTSECSQTSEVS 191
>AF039046-13|AAB94213.1| 551|Caenorhabditis elegans Hypothetical
protein R09B5.4 protein.
Length = 551
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/31 (45%), Positives = 24/31 (77%), Gaps = 2/31 (6%)
Frame = -2
Query: 579 FSIAFL--RTSLLTNGILGILKEEFFAIVSV 493
FS AF R S+ T+G+LG++ ++FFA+++V
Sbjct: 344 FSYAFFEKRYSVATSGLLGLVVQQFFAVLAV 374
>Z92831-5|CAJ58498.1| 247|Caenorhabditis elegans Hypothetical
protein F22G12.8 protein.
Length = 247
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +2
Query: 485 VSVTETIAKNSSFKIPKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDIAAELTKHVG 664
V TE I K++ ++ ++N E+ + I + S MK + NT + A + K
Sbjct: 74 VETTEGIMKSNGIEL----IINKEIDQTKIREIALSRMK---IELNTLAEAAGAILK--- 123
Query: 665 TLRKISLIAEEFNKKTAKNL 724
+RKI+LI + NKK A+++
Sbjct: 124 -IRKINLIEDSINKKIAEDI 142
>AL031627-10|CAA20949.1| 301|Caenorhabditis elegans Hypothetical
protein Y102A5C.19 protein.
Length = 301
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +2
Query: 254 KNIIQTIIESITNALPIKLSRRTTPPKKESPMKI-ETLQKFAPELVPKNTVEIVSIPNQV 430
+ II IES +L KL + + ++ E LQKF PE+ +E +++ Q
Sbjct: 125 RKIILKAIESFFESLNFKLKAKKVIIDDFTAREVSEILQKFEPEI-----LEEITLQAQF 179
Query: 431 LEIVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVN 550
L+ E ++ V+ + + + + S F IP +VN
Sbjct: 180 LKYYE---PINGVVELEQWKKAKILNNRSKFLIPIKHIVN 216
>AC025726-27|AAK73932.2| 383|Caenorhabditis elegans Hypothetical
protein Y71G12B.6 protein.
Length = 383
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 407 IVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVNSEVLKNAIEKRK 586
I I Q+ E V + + V+ ++ + N S + + +N E +KN IE K
Sbjct: 9 ISKISTQLAEAV-LKNGRNVVLLHNNEAIPTNLINNPSLTLINLSSINEEAIKNLIENYK 67
Query: 587 KSLMKDASMNT 619
+ DAS+ T
Sbjct: 68 IQTIFDASLTT 78
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 KNIIQTIIESITNALPIKLSRRTTPPKKESPMKIETLQK-FAPELVPKNTVEIVSIPNQV 430
+ +++T++E P + P + P +ET+Q+ PE+V + +V +
Sbjct: 239 EQVVETVVEPQQAPEP---EQAPEPQQAPEPTVVETVQEEIVPEIVAETEAPVVVAETEA 295
Query: 431 LEIVEAEKAVDNVISMTEVSV 493
+VE E V VI TE V
Sbjct: 296 PAVVETEAPV--VIEETEAPV 314
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
protein C27A2.1 protein.
Length = 1076
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = +2
Query: 254 KNIIQTIIESITNALPI------KLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVS 415
+N I+ + + I +P+ KL+ ++ E MKI +KF E E+ +
Sbjct: 201 ENAIKRLEDEIGKIMPLVENYRKKLALQSKLRLLEKKMKIMEFEKFDREY----KAELQN 256
Query: 416 IPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVNSEVLKNAIEKRKKSL 595
+ ++E E EK++ + ++ + I K+ S +I +M +E+L EK K L
Sbjct: 257 MDGAMIEYREVEKSIAECEKHRK-NLEDRIKKDRS-QISQMQRSCNEILAKVQEKGDKKL 314
Query: 596 MKD 604
M+D
Sbjct: 315 MED 317
>Z79755-3|CAB02108.1| 355|Caenorhabditis elegans Hypothetical
protein F43G9.4 protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +2
Query: 533 KMPLVNSEVLKNAI---EKRKKSLMKDASMNTNTDHDIAAELTK 655
KM +N EV KN EKRKK + + N D D+ + ++K
Sbjct: 117 KMKKMNGEVTKNKTGKPEKRKKKVDSEQQENEEDDEDLMSPVSK 160
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +2
Query: 353 IETLQKFAPELVPKNTVEIVSIPNQVLEIV---EAEKAVDNVISMTEVSVTETIAKNSSF 523
IET K +VPK ++ ++ N+V ++ E E A++ + ++ + +
Sbjct: 190 IETFSKEVNIVVPKKDIDNMNARNEVRRLICVGEMESAIEKMTTLCPTILEDDEINFIVR 249
Query: 524 KIPKMPLVNSEVLKNAIEKRKKSLMKDASMNTNTDHDI 637
K + +V ++ K +E + LMK+ + DI
Sbjct: 250 KQHLIEMVRQKLTKEPVEYFRAHLMKNGQRPCDEKMDI 287
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/78 (21%), Positives = 42/78 (53%)
Frame = +2
Query: 332 KKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAK 511
KKE +KIET++K +++ +E+ ++ EI + + + + E + T I +
Sbjct: 159 KKEGALKIETVEKEKEKIIENRLIELDKYTEEMKEIARVHR--EQLQQIQERNRTLKI-E 215
Query: 512 NSSFKIPKMPLVNSEVLK 565
N+ + ++ + NS++++
Sbjct: 216 NAKQRREQLEIENSKIVQ 233
>Z70311-12|CAA94381.3| 418|Caenorhabditis elegans Hypothetical
protein T25B9.10 protein.
Length = 418
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = +2
Query: 335 KESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKN 514
KE+P+K KF P+ I S ++VL V + + N+ T + K
Sbjct: 317 KEAPIKFPPTHKFEPDTDNYVPKRIPSFTDRVLFWVRNSEWLQNIQYDCMRGTTPSDHK- 375
Query: 515 SSFKIPKMPLVNSEVLKNAIEKRKKSLMKDASMNTNT 625
+ F + ++N V ++ K++KSL ++ SM TN+
Sbjct: 376 AVFATFWLTVINKPVPEH--YKQQKSLEREISMKTNS 410
>Z70306-7|CAA94327.3| 418|Caenorhabditis elegans Hypothetical
protein T25B9.10 protein.
Length = 418
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = +2
Query: 335 KESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKN 514
KE+P+K KF P+ I S ++VL V + + N+ T + K
Sbjct: 317 KEAPIKFPPTHKFEPDTDNYVPKRIPSFTDRVLFWVRNSEWLQNIQYDCMRGTTPSDHK- 375
Query: 515 SSFKIPKMPLVNSEVLKNAIEKRKKSLMKDASMNTNT 625
+ F + ++N V ++ K++KSL ++ SM TN+
Sbjct: 376 AVFATFWLTVINKPVPEH--YKQQKSLEREISMKTNS 410
>AF003740-2|AAM15562.2| 330|Caenorhabditis elegans Hypothetical
protein C41D11.4 protein.
Length = 330
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 263 IQTIIESITNALPIKLSRRTTPPKKESPMKIETLQKFAPELVP 391
+ ++ + T+ALPIK+ ++ P + ++K APE +P
Sbjct: 46 VPSLTRTKTSALPIKMEKKPMVPLRIEQDHQTPIRKLAPESIP 88
>Z93397-5|CAD89745.1| 375|Caenorhabditis elegans Hypothetical
protein ZC482.8 protein.
Length = 375
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 472 NNVIHCFLCFYDF*NLIWYRNYFNSILWYQFRSKFL 365
N+V HCF+CF+ YR ++W++ K +
Sbjct: 322 NSVAHCFICFF---LSSQYRETVKDMIWFKKTKKLM 354
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = +2
Query: 317 RTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVEAEKAVD--NVISMTEVS 490
RT PPK E+P + + + P+ + P + + E K TEVS
Sbjct: 577 RTEPPKTEAPRTVRPKTEAPMTVPPRTEPPMTEAPRTEVPMTEPPKTEPPRTAPPRTEVS 636
Query: 491 VT---ETIAKNSSFKIPKMPL 544
+T ET+ N+ ++P+
Sbjct: 637 MTLPPETVPPNTEAPRTEVPM 657
>U23172-3|AAC46526.1| 547|Caenorhabditis elegans Hypothetical
protein F25B5.5 protein.
Length = 547
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 269 TIIESITNALPIKLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVE 445
T++E + +A P R T+P K+ PM++ L P L + + S ++ LE +E
Sbjct: 319 TLLEKVADAAPDIRFRFTSPHPKDFPMQLIELIASRPNLCKQLHLPAQSGDDETLERME 377
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Frame = +1
Query: 478 DRSFSNRNDRE---ELFLQNS*NA 540
DR+FSN+ND E ++FL NS NA
Sbjct: 444 DRTFSNKNDDELSDDVFLDNSMNA 467
>AF098995-11|AAC67488.2| 415|Caenorhabditis elegans Hypothetical
protein F58E1.11 protein.
Length = 415
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Frame = +2
Query: 353 IETLQKF-APELVPKNTVEIVSIPNQVLEIVEAEKAV-----DNVISMTEVSVT 496
++ L+ F P ++P T++I S+P IVE+ + + D +I++T + VT
Sbjct: 259 LKALRPFLTPSVLPLKTLQICSVPEMPHPIVESAEELTLITKDRLITLTNLKVT 312
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 272 IIESITNALPIKLSRRTTPPKKESPMKIETLQKFAPELVPKNTVEIVSIPNQVLEIVE 445
I+E++ N P L R PPK S K ++K P ++ N + + + N ++ ++
Sbjct: 70 IVETLNNFKPSPLQRSIEPPKTPSINKPSLIKK--PSVILPNPPQNLVVSNLIVSYLQ 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,724,734
Number of Sequences: 27780
Number of extensions: 252739
Number of successful extensions: 950
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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