Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a11
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    27   0.60 
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.4  

>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 27.1 bits (57), Expect = 0.60
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +2

Query: 515 LCCYNHSLKLQRVVPRLLGSLVGGAMSPTQHLEQQQALVKQFAEILE 655
           + C+N+    QR    +     G    PTQHL+  +A +    + L+
Sbjct: 99  MLCFNNGCLFQRDAEVMRKIFSGAITDPTQHLKPIEAAIDALEQFLQ 145


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 419 LYNTVSLLISSRILTGLFGHRRKHRVRSLWAR 324
           + NTVS+L++  I+   F   R HR+  +W R
Sbjct: 304 IMNTVSILVTVIIINWNFRGPRTHRM-PMWIR 334


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +1

Query: 316 RECRAH--NDRTRCLRRCPK 369
           R+C  H   D   C+R+CPK
Sbjct: 263 RKCPEHLLKDNGACVRKCPK 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,601
Number of Sequences: 2352
Number of extensions: 15224
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)