BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3a10
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00006CD291 Cluster: hypothetical protein TTHERM_0026... 37 0.51
UniRef50_Q03XA1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.67
UniRef50_A2TSG7 Cluster: Histidine Kinase; n=1; Dokdonia donghae... 36 0.67
UniRef50_Q2EI21 Cluster: RE1-silencing transcription factor A; n... 34 2.7
UniRef50_UPI00015B50DB Cluster: PREDICTED: similar to protease m... 34 3.6
UniRef50_Q0SRM7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_A5Z367 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
UniRef50_UPI00006CA839 Cluster: hypothetical protein TTHERM_0068... 33 6.3
UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;... 33 6.3
UniRef50_Q5HNF3 Cluster: Cell wall surface anchor family protein... 33 6.3
UniRef50_Q23YB8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_A0CY38 Cluster: Chromosome undetermined scaffold_30, wh... 33 6.3
UniRef50_Q13127 Cluster: RE1-silencing transcription factor; n=3... 33 6.3
UniRef50_UPI00006607C1 Cluster: LIM domain and actin-binding pro... 33 8.3
UniRef50_Q2RMK8 Cluster: Transcriptional Regulator, XRE family; ... 33 8.3
UniRef50_A6H1Z4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
UniRef50_Q59YU3 Cluster: Likely protein kinase; n=1; Candida alb... 33 8.3
UniRef50_A7TNK1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
UniRef50_A3M0I1 Cluster: Predicted protein; n=2; Saccharomycetac... 33 8.3
>UniRef50_UPI00006CD291 Cluster: hypothetical protein
TTHERM_00266280; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266280 - Tetrahymena
thermophila SB210
Length = 1000
Score = 36.7 bits (81), Expect = 0.51
Identities = 25/106 (23%), Positives = 49/106 (46%)
Frame = +2
Query: 344 DKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVEFPVKMA 523
+K + L R F+ + ++Y F +Q+ + +P N KSW K++F K++
Sbjct: 662 EKISQLSNREFLTIFKEYIPDFSSQIE--YADQYQLPNLNKKSWNKNKFQKYLNKKTNQ- 718
Query: 524 SFFQPSLYQIVGPEAKQRDFYGGATNENDNKMKMKTTVTDHNNAPN 661
+ E KQ+ T++NDN + + +T++ N P+
Sbjct: 719 EIIDLQVQNSNQNEEKQQ------TDDNDNFQENQEKITENENRPS 758
>UniRef50_Q03XA1 Cluster: Putative uncharacterized protein; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Putative uncharacterized protein - Leuconostoc
mesenteroides subsp. mesenteroides (strain ATCC 8293
/NCDO 523)
Length = 490
Score = 36.3 bits (80), Expect = 0.67
Identities = 44/177 (24%), Positives = 66/177 (37%), Gaps = 7/177 (3%)
Frame = +2
Query: 137 GFYVPFSTSELTDEDSAILAENYGLLSNQMKSTTLKTRFAKSEQTLFTSNNMGLLSEDL- 313
G Y S + +L+E+Y +S +KS TLK R K +LS L
Sbjct: 149 GTYSESLISNKSSHQDKVLSESYISISKDIKSRTLKRRALKDRAEYIMDLMHSILSSQLV 208
Query: 314 ---DETPLREHATDKPNNLKERAFVYLNQKYKTPF--QNQVYDLHMQAMDIPLRNYKSWA 478
D K N K L+ + F QN MQ ++ +N +S A
Sbjct: 209 IIHDSNQDTGFKIFKDINSKGIPLTQLDLLKSSIFEEQNNKSATAMQQIEAHWKNLESLA 268
Query: 479 KSRFS-KFVEFPVKMASFFQPSLYQIVGPEAKQRDFYGGATNENDNKMKMKTTVTDH 646
+ + F +F V S P + A D Y T+ +DN + TT+ D+
Sbjct: 269 YEKLNMDFFDFIVLSWSVLYPKTITEIDSGASLYDLYNELTDTDDN---LSTTLIDN 322
>UniRef50_A2TSG7 Cluster: Histidine Kinase; n=1; Dokdonia
donghaensis MED134|Rep: Histidine Kinase - Dokdonia
donghaensis MED134
Length = 731
Score = 36.3 bits (80), Expect = 0.67
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +2
Query: 182 SAILAENYGLLSNQMKSTTLKTRFAKSEQTLFTSNNMGLLSEDLDETPLREHATDKPNNL 361
+A+L E+Y L + S L F + E T N GLL TP+ ++ N L
Sbjct: 256 TALLDEDYNLTVDYSFSLELNNEFGRREIKDKTDNIRGLL------TPVFRKELEEENYL 309
Query: 362 KER--AFVYLNQKYKTPFQNQVYDLHMQAMD-IPLRNY 466
+E F+ Q++K PF N + +++ +D LRNY
Sbjct: 310 EEDIVKFIAEFQEHKNPFGNILMEIYSYDLDSATLRNY 347
>UniRef50_Q2EI21 Cluster: RE1-silencing transcription factor A; n=6;
Euteleostomi|Rep: RE1-silencing transcription factor A -
Xenopus laevis (African clawed frog)
Length = 1501
Score = 34.3 bits (75), Expect = 2.7
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP ++ ++V NQ T QV++ + + P +YK+ +S F K VE
Sbjct: 321 MRTHSGEKPFKCEQCSYVASNQHEVTRHARQVHN-GPKPLTCPHCDYKTADRSNFKKHVE 379
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 380 LHVNPRQFLCP 390
>UniRef50_UPI00015B50DB Cluster: PREDICTED: similar to protease m1
zinc metalloprotease; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to protease m1 zinc metalloprotease -
Nasonia vitripennis
Length = 918
Score = 33.9 bits (74), Expect = 3.6
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Frame = +2
Query: 164 ELTDEDSAILAE-NY---GLLSNQMKSTTLKTRFAKSEQTLFTSNNMGLLSEDLDETPLR 331
E DE SAI +Y G + M+ +T F K T N G + D + L+
Sbjct: 399 ESPDEISAIFDNISYSKAGAVIRMMQHFLTETVFKKGLTAYLTGKNHGAANSDDLFSALQ 458
Query: 332 EHATDKPNNLKERAFVYLNQK 394
A D P N+KE ++NQK
Sbjct: 459 NEAKDNPKNVKEIMDTWVNQK 479
>UniRef50_Q0SRM7 Cluster: Putative uncharacterized protein; n=1;
Clostridium perfringens SM101|Rep: Putative
uncharacterized protein - Clostridium perfringens
(strain SM101 / Type A)
Length = 121
Score = 33.9 bits (74), Expect = 3.6
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = -3
Query: 341 LRALLKESHQGLRSANPYYLM*IMFVRILQILFLV*SISFGYLKGHSFLPILQSLHL 171
LR ++E+ + + N YL+ + F+ I+ I+ V ++FG ++G F+PI+ + L
Sbjct: 44 LREFMQETKERFKKENICYLIMLHFINIICIVITVFIVTFGDVRG-CFIPIIVGIFL 99
>UniRef50_A5Z367 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 115
Score = 33.9 bits (74), Expect = 3.6
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1
Query: 280 CK*CLFGFCKSC-F*CSRFHLVT*KAIVFCQYCRVFIC 170
CK C+F FC+ C F C R+ + I FC+ C +F C
Sbjct: 60 CKGCIF-FCRRCIFFCRRYIFFCRRCIFFCRRC-IFFC 95
>UniRef50_UPI00006CA839 Cluster: hypothetical protein
TTHERM_00688610; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00688610 - Tetrahymena
thermophila SB210
Length = 1136
Score = 33.1 bits (72), Expect = 6.3
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = +2
Query: 260 SEQTLFTSNNMGLLSEDLDETPLREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQ 439
++Q+L +N+ D + PL + +++ N K+ + Q Y+TP QNQ+ +L
Sbjct: 32 TQQSLSNNNDPNKQKLDNQKMPLIKQSSNSSNQNKQSL---IQQSYQTPKQNQL-NLSQN 87
Query: 440 AMDIPLRNYKSWAKS 484
+ IP NYK+ A++
Sbjct: 88 SFYIP-NNYKTTAET 101
>UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 1221
Score = 33.1 bits (72), Expect = 6.3
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 314 DETPLREHATDKPNNLKERAFV-YLNQKYKT 403
DETP REH+T KP N + FV Y N T
Sbjct: 474 DETPSREHSTSKPANTQHNTFVLYENSSRDT 504
>UniRef50_Q5HNF3 Cluster: Cell wall surface anchor family protein;
n=3; cellular organisms|Rep: Cell wall surface anchor
family protein - Staphylococcus epidermidis (strain ATCC
35984 / RP62A)
Length = 3692
Score = 33.1 bits (72), Expect = 6.3
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 242 KTRFAKSEQTLFTSNNMGLLSEDLDETPLREHATDKPNNLKERAFVYLN 388
+T A +E+ +N + L E+ D L+ H TD+ NN+K +A +N
Sbjct: 2417 QTPNATAEEKEEANNKVDRLQEEADANILKAHTTDEVNNIKNQAVQNIN 2465
>UniRef50_Q23YB8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 549
Score = 33.1 bits (72), Expect = 6.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 179 DSAILAENYGLLSNQMKSTTLKTRFAKSEQTLFTSNNMGLLSEDLDETPLREHATDKPNN 358
DS +ENY +S Q S+T T K ++ N+ S+ LD+ E D +N
Sbjct: 138 DSETSSENYEQISGQYSSSTSST--CKMQKPQQQKQNINFHSKVLDQCGQLEELEDSLSN 195
Query: 359 LKERAFVYLNQK 394
LK + V +N +
Sbjct: 196 LKSTSQVSINSQ 207
>UniRef50_A0CY38 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 200
Score = 33.1 bits (72), Expect = 6.3
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 239 LKTRFAKSEQTLFTSNNMGLLSEDLDETPLREH----ATDKPNNLKERAFVYLNQKYKTP 406
L+ FA S+Q F S N + + + + L+E A +KP N + +++ + + ++
Sbjct: 10 LQQSFATSKQN-FISKNQSIEKQSIQNSQLKEQRPSLAYNKPQNTQNASYIRIIENFEND 68
Query: 407 FQNQVYDLHMQAMDIPLRN 463
+ +Y ++ MD+ +N
Sbjct: 69 NKENLYQKLVKKMDVQRQN 87
>UniRef50_Q13127 Cluster: RE1-silencing transcription factor; n=32;
Amniota|Rep: RE1-silencing transcription factor - Homo
sapiens (Human)
Length = 1097
Score = 33.1 bits (72), Expect = 6.3
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP + ++V NQ T QV++ + ++ P +YK+ +S F K VE
Sbjct: 323 MRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN-GPKPLNCPHCDYKTADRSNFKKHVE 381
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 382 LHVNPRQFNCP 392
>UniRef50_UPI00006607C1 Cluster: LIM domain and actin-binding
protein 1 (Epithelial protein lost in neoplasm).; n=1;
Takifugu rubripes|Rep: LIM domain and actin-binding
protein 1 (Epithelial protein lost in neoplasm). -
Takifugu rubripes
Length = 630
Score = 32.7 bits (71), Expect = 8.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 146 VPFSTSELTDEDSAILAENYGLLSNQMKSTTLKTRFAKSEQTLFTSN 286
VPFS S+ + + A+ ++S + KSTT+ RF+K + N
Sbjct: 3 VPFSRSQWASQSVRVTAKEMSIVSTRGKSTTIAERFSKYQMAADDGN 49
>UniRef50_Q2RMK8 Cluster: Transcriptional Regulator, XRE family;
n=3; Alphaproteobacteria|Rep: Transcriptional Regulator,
XRE family - Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255)
Length = 103
Score = 32.7 bits (71), Expect = 8.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 449 IPLRNYKSWAKSRFSKFVEFPVKMASFFQPSLYQIV 556
+P Y+SWAK+ + F KM SF+ P Y I+
Sbjct: 60 VPPDRYESWAKALNLDVIPFVKKMMSFYDPVTYDIL 95
>UniRef50_A6H1Z4 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative
uncharacterized protein - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 162
Score = 32.7 bits (71), Expect = 8.3
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 302 SEDLDETPLREHATDKPNNLKERAFVYLNQKYKTPFQNQVY 424
SE+L T E KP +KER V +N KY+ PF ++Y
Sbjct: 31 SEELQTTTSNEFVL-KPIEIKERDTVAINVKYRDPFLGKMY 70
>UniRef50_Q59YU3 Cluster: Likely protein kinase; n=1; Candida
albicans|Rep: Likely protein kinase - Candida albicans
(Yeast)
Length = 585
Score = 32.7 bits (71), Expect = 8.3
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 506 FPVKMASFFQPSLYQIVGPEAKQRDFYGGATNENDNKMKMKTTVTDHNNAPN 661
FP K+ PS GP+ + + N N+N TT + NN N
Sbjct: 409 FPWKLPKLSDPSYRSFAGPQLNNHNHHHNNNNNNNNNNNNNTTSANSNNDVN 460
>UniRef50_A7TNK1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1302
Score = 32.7 bits (71), Expect = 8.3
Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 4/142 (2%)
Frame = +2
Query: 215 SNQMKSTTLKTRFAKSEQTLFTSNNMGLLSE-DLD-ETPLREHATDKPNNLKERAFVYLN 388
S+ + +TT T + + L + LS +L TP E + + + + Y+N
Sbjct: 198 SSNLSNTTSSTAVIPNSENLINNREPTSLSNVNLSGSTPKLEASGNDQEIINPNSIFYMN 257
Query: 389 QKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVEFPVKMASFFQPSL-YQIVGPE 565
+Q++ L ++I +N+K S + F ++F +L + +V P+
Sbjct: 258 SAIDVKDWSQLHQLINTNIEITYKNFKDTRFSSGNYFKSLDKLTSTFLHVNLAFNLVKPQ 317
Query: 566 -AKQRDFYGGATNENDNKMKMK 628
K D Y NE +K K +
Sbjct: 318 NFKNNDDYDLIWNEKTHKKKFQ 339
>UniRef50_A3M0I1 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 698
Score = 32.7 bits (71), Expect = 8.3
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 509 PVKMASFFQ--PSLYQIVGPEAKQRDFYGGATNENDNKMKMKTTVTDHNN 652
P +M S Q PSL + YGG +N N N + +++HNN
Sbjct: 10 PNQMDSVMQRRPSLSSLSSTSGYASSTYGGTSNSNQNNQNNQNNISNHNN 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,480,263
Number of Sequences: 1657284
Number of extensions: 12064296
Number of successful extensions: 32219
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 30657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32188
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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