Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3a10
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein. 33 0.93
U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein. 33 0.93
U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silenc... 33 0.93
BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing transcrip... 33 0.93
BC038985-1|AAH38985.1| 454|Homo sapiens Similar to RE1-silencin... 33 0.93
BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for IM... 33 0.93
AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing transcrip... 33 0.93
U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein. 31 2.8
AC006316-1|AAD29127.1| 2126|Homo sapiens unknown protein. 31 2.8
>U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.
Length = 1088
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP + ++V NQ T QV++ + ++ P +YK+ +S F K VE
Sbjct: 322 MRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN-GPKPLNCPHCDYKTADRSNFKKHVE 380
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 381 LHVNPRQFNCP 391
>U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.
Length = 1097
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP + ++V NQ T QV++ + ++ P +YK+ +S F K VE
Sbjct: 323 MRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN-GPKPLNCPHCDYKTADRSNFKKHVE 381
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 382 LHVNPRQFNCP 392
>U13879-1|AAC50115.1| 681|Homo sapiens neuron-restrictive silencer
factor protein.
Length = 681
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP + ++V NQ T QV++ + ++ P +YK+ +S F K VE
Sbjct: 405 MRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN-GPKPLNCPHCDYKTADRSNFKKHVE 463
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 464 LHVNPRQFNCP 474
>BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing
transcription factor protein.
Length = 1097
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP + ++V NQ T QV++ + ++ P +YK+ +S F K VE
Sbjct: 323 MRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN-GPKPLNCPHCDYKTADRSNFKKHVE 381
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 382 LHVNPRQFNCP 392
>BC038985-1|AAH38985.1| 454|Homo sapiens Similar to RE1-silencing
transcription factor protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP + ++V NQ T QV++ + ++ P +YK+ +S F K VE
Sbjct: 323 MRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN-GPKPLNCPHCDYKTADRSNFKKHVE 381
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 382 LHVNPRQFNCP 392
>BC017822-1|AAH17822.1| 460|Homo sapiens Unknown (protein for
IMAGE:4690075) protein.
Length = 460
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP + ++V NQ T QV++ + ++ P +YK+ +S F K VE
Sbjct: 323 MRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN-GPKPLNCPHCDYKTADRSNFKKHVE 381
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 382 LHVNPRQFNCP 392
>AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing
transcription factor variant protein.
Length = 1126
Score = 33.1 bits (72), Expect = 0.93
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 326 LREHATDKPNNLKERAFVYLNQKYKTPFQNQVYDLHMQAMDIPLRNYKSWAKSRFSKFVE 505
+R H+ +KP + ++V NQ T QV++ + ++ P +YK+ +S F K VE
Sbjct: 352 MRTHSGEKPFKCDQCSYVASNQHEVTRHARQVHN-GPKPLNCPHCDYKTADRSNFKKHVE 410
Query: 506 FPVKMASFFQP 538
V F P
Sbjct: 411 LHVNPRQFNCP 421
>U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.
Length = 3460
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 116 WYVKSNVGFYVPFSTSELTDEDSAILAENYGLLSNQMKSTTLKTR-FAKSEQTLFTSN-N 289
+Y N+G Y P+S+ +EDSA++ +SN++ ++ TR +E T+ N
Sbjct: 1972 FYPGGNIGLYCPYSSKGAPEEDSAMV-----FVSNEVGEHSITTRDLNVNENTIIQFEIN 2026
Query: 290 MGLLSEDLDETPLR 331
+G ++ P+R
Sbjct: 2027 VGCSTDSSSADPVR 2040
>AC006316-1|AAD29127.1| 2126|Homo sapiens unknown protein.
Length = 2126
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 116 WYVKSNVGFYVPFSTSELTDEDSAILAENYGLLSNQMKSTTLKTR-FAKSEQTLFTSN-N 289
+Y N+G Y P+S+ +EDSA++ +SN++ ++ TR +E T+ N
Sbjct: 1542 FYPGGNIGLYCPYSSKGAPEEDSAMV-----FVSNEVGEHSITTRDLNVNENTIIQFEIN 1596
Query: 290 MGLLSEDLDETPLR 331
+G ++ P+R
Sbjct: 1597 VGCSTDSSSADPVR 1610
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,246,948
Number of Sequences: 237096
Number of extensions: 1778879
Number of successful extensions: 2857
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2841
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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