BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3a10
(673 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p pro... 29 4.4
BT022820-1|AAY55236.1| 664|Drosophila melanogaster IP13211p pro... 29 4.4
BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p pro... 29 4.4
AY122196-1|AAM52708.1| 352|Drosophila melanogaster LD45766p pro... 29 4.4
AE014297-4592|AAF57045.2| 666|Drosophila melanogaster CG15534-P... 29 4.4
AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA... 29 4.4
>BT028799-1|ABI34180.1| 634|Drosophila melanogaster LD13728p
protein.
Length = 634
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 302 SEDLDETPLREHATDKPNNLKERAFVYLNQKYKTPFQN-QVYDLHMQ 439
+ED E REH TD+ + + E +Y K P++ + Y HM+
Sbjct: 303 NEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHME 349
>BT022820-1|AAY55236.1| 664|Drosophila melanogaster IP13211p
protein.
Length = 664
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 211 KAIVFCQYCRVFICQLTSTEWNVKTNIRFHIPQE 110
K+ FC + ICQ+ E+N+ +I+ +PQE
Sbjct: 165 KSNTFCSMLPIPICQVKQDEYNLTLSIQGDLPQE 198
>BT011357-1|AAR96149.1| 634|Drosophila melanogaster RE70312p
protein.
Length = 634
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 302 SEDLDETPLREHATDKPNNLKERAFVYLNQKYKTPFQN-QVYDLHMQ 439
+ED E REH TD+ + + E +Y K P++ + Y HM+
Sbjct: 303 NEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHME 349
>AY122196-1|AAM52708.1| 352|Drosophila melanogaster LD45766p
protein.
Length = 352
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 302 SEDLDETPLREHATDKPNNLKERAFVYLNQKYKTPFQN-QVYDLHMQ 439
+ED E REH TD+ + + E +Y K P++ + Y HM+
Sbjct: 21 NEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHME 67
>AE014297-4592|AAF57045.2| 666|Drosophila melanogaster CG15534-PA
protein.
Length = 666
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 211 KAIVFCQYCRVFICQLTSTEWNVKTNIRFHIPQE 110
K+ FC + ICQ+ E+N+ +I+ +PQE
Sbjct: 167 KSNTFCSMLPIPICQVKQDEYNLTLSIQGDLPQE 200
>AE014297-1108|AAF54502.3| 634|Drosophila melanogaster CG6254-PA
protein.
Length = 634
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 302 SEDLDETPLREHATDKPNNLKERAFVYLNQKYKTPFQN-QVYDLHMQ 439
+ED E REH TD+ + + E +Y K P++ + Y HM+
Sbjct: 303 NEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHME 349
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,905,848
Number of Sequences: 53049
Number of extensions: 539009
Number of successful extensions: 1503
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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