Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a09
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding pr...    28   0.36 
AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding pr...    28   0.36 
AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine pr...    28   0.36 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.5  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    24   5.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   5.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   7.7  

>AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP54 protein.
          Length = 176

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +1

Query: 340 TGRHYSVSCPSLVTELKKSCRPSDH---MGPFGTRAVSCVSIKAPIQCP 477
           T +  +  C + +TE+KK  +  DH     P G   + C+      +CP
Sbjct: 108 TAKTIATECITTITEMKKKIQERDHDMKCSPVGAFFMMCLMKHTQAKCP 156


>AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding
           protein OBP5470 protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +1

Query: 340 TGRHYSVSCPSLVTELKKSCRPSDH---MGPFGTRAVSCVSIKAPIQCP 477
           T +  +  C + +TE+KK  +  DH     P G   + C+      +CP
Sbjct: 71  TAKTIATECITTITEMKKKIQERDHDMKCSPVGAFFMMCLMKHTQAKCP 119


>AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine
           protein 1 protein.
          Length = 162

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +1

Query: 340 TGRHYSVSCPSLVTELKKSCRPSDH---MGPFGTRAVSCVSIKAPIQCP 477
           T +  +  C + +TE+KK  +  DH     P G   + C+      +CP
Sbjct: 108 TAKTIATECITTITEMKKKIQERDHDMKCSPVGAFFMMCLMKHTQAKCP 156


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 354 QRVVSQPCYRAQEELPTKRSHGPL 425
           Q   + P Y  Q++LPTK+ H  L
Sbjct: 391 QSAAAPPSYWKQKKLPTKKQHKQL 414


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 302 YW*LRAADERLDELVATTACRVPALLQSSRRVADQA 409
           YW  R   + L EL+A  A   P   +  R V+D A
Sbjct: 126 YWSFRCYSDALGELIAHPAYVAPCGQEIRRAVSDCA 161


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 241 DSSPQPITARCFSWCPRKSKLAP 173
           D++  P+T R  + CP+ S L P
Sbjct: 616 DTTDGPVTRRVSAGCPQGSMLGP 638


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 477  GALNRSFDGNARNSSSSKGAH 415
            GALNR  +G+  ++SSS   H
Sbjct: 1080 GALNRCSNGSCSSTSSSHSNH 1100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,905
Number of Sequences: 2352
Number of extensions: 13844
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)