Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3a09
(752 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 33 0.32
BT021343-1|AAX33491.1| 647|Drosophila melanogaster LP21163p pro... 32 0.97
AE014298-2492|AAF48674.2| 647|Drosophila melanogaster CG9108-PA... 32 0.97
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio... 31 2.2
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot... 31 2.2
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240... 31 2.2
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot... 31 2.2
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD... 31 2.2
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC... 31 2.2
AY089683-1|AAL90421.1| 340|Drosophila melanogaster RH59033p pro... 29 9.0
AE013599-937|AAF58893.2| 340|Drosophila melanogaster CG1665-PA ... 29 9.0
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 33.5 bits (73), Expect = 0.32
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +1
Query: 283 KTAQTKVLVTPCGGRATRRTGRHYSVSC-PSLVTELKKSCRPSDHMGPFGTRAVSCVSIK 459
KT +PCG A G+ SC P + CRP + R +CV+ K
Sbjct: 20378 KTPSDPCQPSPCGANALCNNGQ---CSCLPEYHGDPYTGCRPECVLNSDCPRNRACVNQK 20434
Query: 460 APIQCPPHCPLCAL 501
CP HC L AL
Sbjct: 20435 CVDPCPGHCGLNAL 20448
Score = 32.3 bits (70), Expect = 0.73
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
Frame = +1
Query: 283 KTAQTKVLVTPCGGRAT-RRTGRHYSVSCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIK 459
+T + + +PCG R G SC +CRP + P ++C+S K
Sbjct: 17535 ETPRDPCVPSPCGAFGQCRAQGNQAICSCLPGYYGAPPNCRPECAINPDCASHLACISEK 17594
Query: 460 APIQCPPHCPLCALGLLQPVTPVVGLKRSY 549
CP C L A + TP+ Y
Sbjct: 17595 CRDPCPGSCGLQAQCSVINHTPICSCPSGY 17624
Score = 29.1 bits (62), Expect = 6.8
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Frame = +1
Query: 310 TPCGGRAT--RRTGRHYSVSCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPH 483
+PCG A R G P + CRP + +R SCV+ K CP
Sbjct: 10921 SPCGPNAECRERNGAGSCTCLPEYFGDPYSGCRPECVVNSDCSRDKSCVNQKCVDPCPGV 10980
Query: 484 CPLCA 498
C L A
Sbjct: 10981 CGLNA 10985
>BT021343-1|AAX33491.1| 647|Drosophila melanogaster LP21163p
protein.
Length = 647
Score = 31.9 bits (69), Expect = 0.97
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = -2
Query: 688 VAPSCTGRSAAAGSRVA-----TDSHSPMDSRTGRTGTDTAHSSGAYQPA*STTSLDQPQ 524
V+P+ TG A A + A T S SP S T TA GA A +TTS
Sbjct: 81 VSPAATGTGAVATAASAPAAAGTTSASPPASNPTTASTSTASVVGAKTAAATTTSSSSAT 140
Query: 523 V*RAAANPKHITGSEGGI 470
AA +GS GG+
Sbjct: 141 SSSTAAAGSKQSGSSGGL 158
>AE014298-2492|AAF48674.2| 647|Drosophila melanogaster CG9108-PA
protein.
Length = 647
Score = 31.9 bits (69), Expect = 0.97
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = -2
Query: 688 VAPSCTGRSAAAGSRVA-----TDSHSPMDSRTGRTGTDTAHSSGAYQPA*STTSLDQPQ 524
V+P+ TG A A + A T S SP S T TA GA A +TTS
Sbjct: 81 VSPAATGTGAVATAASAPAAAGTTSASPPASNPTTASTSTASVVGAKTAAATTTSSSSAT 140
Query: 523 V*RAAANPKHITGSEGGI 470
AA +GS GG+
Sbjct: 141 SSSTAAAGSKQSGSSGGL 158
>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
coactivator blindspot protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +1
Query: 310 TPCGGRAT-RRTGRHYSVSCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPHC 486
TP GG +T R S P E + PS H ++ S + + PH
Sbjct: 575 TPHGGASTYSRNSLGGDSSMPVASVESPATPAPSPHPNSAHSQPTSVPPAEQLLNMSPHA 634
Query: 487 PLCALGLLQPVTPV 528
P L QP TP+
Sbjct: 635 PTSVSNLQQPPTPI 648
>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj
protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +1
Query: 310 TPCGGRAT-RRTGRHYSVSCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPHC 486
TP GG +T R S P E + PS H ++ S + + PH
Sbjct: 575 TPHGGASTYSRNSLGGDSSMPVASVESPATPAPSPHPNSAHSQPTSVPPAEQLLNMSPHA 634
Query: 487 PLCALGLLQPVTPV 528
P L QP TP+
Sbjct: 635 PTSVSNLQQPPTPI 648
>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +1
Query: 310 TPCGGRAT-RRTGRHYSVSCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPHC 486
TP GG +T R S P E + PS H ++ S + + PH
Sbjct: 575 TPHGGASTYSRNSLGGDSSMPVASVESPATPAPSPHPNSAHSQPTSVPPAEQLLNMSPHA 634
Query: 487 PLCALGLLQPVTPV 528
P L QP TP+
Sbjct: 635 PTSVSNLQQPPTPI 648
>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240
protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +1
Query: 310 TPCGGRAT-RRTGRHYSVSCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPHC 486
TP GG +T R S P E + PS H ++ S + + PH
Sbjct: 575 TPHGGASTYSRNSLGGDSSMPVASVESPATPAPSPHPNSAHSQPTSVPPAEQLLNMSPHA 634
Query: 487 PLCALGLLQPVTPV 528
P L QP TP+
Sbjct: 635 PTSVSNLQQPPTPI 648
>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
isoform D protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +1
Query: 310 TPCGGRAT-RRTGRHYSVSCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPHC 486
TP GG +T R S P E + PS H ++ S + + PH
Sbjct: 575 TPHGGASTYSRNSLGGDSSMPVASVESPATPAPSPHPNSAHSQPTSVPPAEQLLNMSPHA 634
Query: 487 PLCALGLLQPVTPV 528
P L QP TP+
Sbjct: 635 PTSVSNLQQPPTPI 648
>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
isoform C protein.
Length = 2618
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +1
Query: 310 TPCGGRAT-RRTGRHYSVSCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPHC 486
TP GG +T R S P E + PS H ++ S + + PH
Sbjct: 575 TPHGGASTYSRNSLGGDSSMPVASVESPATPAPSPHPNSAHSQPTSVPPAEQLLNMSPHA 634
Query: 487 PLCALGLLQPVTPV 528
P L QP TP+
Sbjct: 635 PTSVSNLQQPPTPI 648
>AY089683-1|AAL90421.1| 340|Drosophila melanogaster RH59033p
protein.
Length = 340
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 579 WAVSVPVRPVRLSIGLWLSVATLEPAAALRPVH 677
W VS+ V P I W S A L+ + L+ VH
Sbjct: 153 WGVSIDVMPCGDRINTWFSQAILKKESGLKLVH 185
>AE013599-937|AAF58893.2| 340|Drosophila melanogaster CG1665-PA
protein.
Length = 340
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 579 WAVSVPVRPVRLSIGLWLSVATLEPAAALRPVH 677
W VS+ V P I W S A L+ + L+ VH
Sbjct: 153 WGVSIDVMPCGDRINTWFSQAILKKESGLKLVH 185
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,108,104
Number of Sequences: 53049
Number of extensions: 665252
Number of successful extensions: 2157
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2157
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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