Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a09
         (752 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68748-8|CAL36498.1|  583|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z68748-4|CAD27622.1|  617|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z68748-3|CAA92953.2|  615|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z73969-6|CAA98236.1|  295|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC006809-4|AAO25980.1|  339|Caenorhabditis elegans Activated in ...    29   3.5  
AL117193-4|CAB54984.1|  335|Caenorhabditis elegans Hypothetical ...    28   6.2  
AL117193-3|CAB54983.1|  335|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z68748-8|CAL36498.1|  583|Caenorhabditis elegans Hypothetical
           protein F13H10.3c protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 176 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 87
           PLM+FK+ TFF K   L T +++Y + FV+S
Sbjct: 327 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 357


>Z68748-4|CAD27622.1|  617|Caenorhabditis elegans Hypothetical
           protein F13H10.3b protein.
          Length = 617

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 176 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 87
           PLM+FK+ TFF K   L T +++Y + FV+S
Sbjct: 361 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 391


>Z68748-3|CAA92953.2|  615|Caenorhabditis elegans Hypothetical
           protein F13H10.3a protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -1

Query: 176 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 87
           PLM+FK+ TFF K   L T +++Y + FV+S
Sbjct: 359 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 389


>Z73969-6|CAA98236.1|  295|Caenorhabditis elegans Hypothetical
           protein C12D8.8 protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
 Frame = +1

Query: 427 GTRAVSCVSIKAPIQCPP------HCPLCALGLLQPVTPVVGLKRS 546
           G R   C  + API CPP       CP   +G + P+ P+  + R+
Sbjct: 124 GQRGQDCTIVYAPIICPPVSQECVKCPPGPVGAIGPMGPIGSMGRA 169


>AC006809-4|AAO25980.1|  339|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 4 protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +1

Query: 361 SCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPHC-PLCALGLLQPVTPVVGL 537
           S PS V++ + +C+ S        +A SC +  AP+QC P C P C    + P   ++ L
Sbjct: 100 SAPS-VSQCQSTCQQS-------CQASSCYT-PAPVQCQPSCMPACKQSCVAPAPQIISL 150


>AL117193-4|CAB54984.1|  335|Caenorhabditis elegans Hypothetical
           protein Y105C5A.5 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 460 APIQCPPHC-PLCALGLLQPVTPVVGL 537
           AP+QC P C P+C    + P   V+ L
Sbjct: 125 APVQCQPSCMPVCEQSCVAPAPQVISL 151


>AL117193-3|CAB54983.1|  335|Caenorhabditis elegans Hypothetical
           protein Y105C5A.4 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 460 APIQCPPHC-PLCALGLLQPVTPVVGL 537
           AP+QC P C P+C    + P   V+ L
Sbjct: 125 APVQCQPSCMPVCEQSCVAPAPQVISL 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,709,317
Number of Sequences: 27780
Number of extensions: 316587
Number of successful extensions: 794
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)