Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a06
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    27   0.15 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          27   0.15 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.6  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 315 FQFNNLRINFNFPHLNAYRFINQY 244
           +QFN+ + NFN+ +  AY   N Y
Sbjct: 204 YQFNDPQFNFNYQYNQAYSNYNNY 227


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 315 FQFNNLRINFNFPHLNAYRFINQY 244
           +QFN+ + NFN+ +  AY   N Y
Sbjct: 224 YQFNDPQFNFNYQYNQAYSNYNNY 247


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +1

Query: 244 VLVYEAICIQVWK 282
           +  Y +ICI++W+
Sbjct: 220 IFTYTSICIEIWQ 232


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/37 (21%), Positives = 21/37 (56%)
 Frame = -1

Query: 128 LHRVHLIVDLFLPFLKFLNT*FKVLVLYFFRYKNAIY 18
           L+ +HL++ + + F+  +   + V+ ++FF   +  Y
Sbjct: 250 LYSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVRY 286


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 383 WKLFCFTRTARPVSPKSPLICSNT 454
           W LFC   T      K+PL+   T
Sbjct: 4   WGLFCVLVTLATARNKAPLLDDGT 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,587
Number of Sequences: 336
Number of extensions: 3660
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)