Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a06
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2236|AAF49850.1|  451|Drosophila melanogaster CG11253-P...   161   9e-40
AY113309-1|AAM29314.1|  451|Drosophila melanogaster AT27448p pro...   161   1e-39
AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-P...    31   1.2  
AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,...    29   6.4  

>AE014296-2236|AAF49850.1|  451|Drosophila melanogaster CG11253-PA
           protein.
          Length = 451

 Score =  161 bits (391), Expect = 9e-40
 Identities = 75/197 (38%), Positives = 126/197 (63%)
 Frame = +1

Query: 127 RWVDWHIRLQKLNQQAVLEASSMREELTKETLISCGKLPVLVYEAICIQVWKIKIYPQIV 306
           +W++ H  +  L+QQA LE S  REE  KE LIS  KL VL++EA C+ +WK ++ P ++
Sbjct: 29  KWLEVHEMILGLSQQAALELSQNREEEVKEFLISRDKLRVLIHEAYCVTLWKTRVLPHLL 88

Query: 307 KLEPAPNNTFGLYMVLYHEAAAVGLLETVLFHEDGATCISEIAIDLLQYALDQLTALLAL 486
           +++P P  TF +Y VLYHEAA V LL+  L+H  G   + E  +DL+ Y    ++ ++ L
Sbjct: 89  EIDPNPQATFLIYTVLYHEAALVALLDVCLYHPSGCETLQESVLDLIDYCAQAISQVIGL 148

Query: 487 INTGYLKPISVNDIECESPIEELERQKRDLQFDISMRCISIVRYLAEHMEVAGIGASIST 666
           ++ GY +  +  D++ E+ + ELERQKRD  + I +RCIS++ Y+A+++ +  + A  + 
Sbjct: 149 VSMGYHENETKLDVD-EAVLTELERQKRDFIYKIGLRCISVLNYIADNVTLFHLSA--AR 205

Query: 667 NIYKTHDVPSLLCHLIT 717
            +  THD+P L+  +++
Sbjct: 206 RLLVTHDIPWLMADVLS 222


>AY113309-1|AAM29314.1|  451|Drosophila melanogaster AT27448p
           protein.
          Length = 451

 Score =  161 bits (390), Expect = 1e-39
 Identities = 75/197 (38%), Positives = 126/197 (63%)
 Frame = +1

Query: 127 RWVDWHIRLQKLNQQAVLEASSMREELTKETLISCGKLPVLVYEAICIQVWKIKIYPQIV 306
           +W++ H  +  L+QQA LE S  REE  KE LIS  KL VL++EA C+ +WK ++ P ++
Sbjct: 29  KWLEVHEMILGLSQQAALELSQNREEEVKEFLISRDKLRVLIHEAYCVTLWKTRVLPHLL 88

Query: 307 KLEPAPNNTFGLYMVLYHEAAAVGLLETVLFHEDGATCISEIAIDLLQYALDQLTALLAL 486
           +++P P  TF +Y VLYHEAA V LL+  L+H  G   + E  +DL+ Y    ++ ++ L
Sbjct: 89  EIDPNPQATFLIYTVLYHEAALVALLDMCLYHPSGCETLQESVLDLIDYCAQAISQVIGL 148

Query: 487 INTGYLKPISVNDIECESPIEELERQKRDLQFDISMRCISIVRYLAEHMEVAGIGASIST 666
           ++ GY +  +  D++ E+ + ELERQKRD  + I +RCIS++ Y+A+++ +  + A  + 
Sbjct: 149 VSMGYHENETKLDVD-EAVLTELERQKRDFIYKIGLRCISVLNYIADNVTLFHLSA--AR 205

Query: 667 NIYKTHDVPSLLCHLIT 717
            +  THD+P L+  +++
Sbjct: 206 RLLVTHDIPWLMADVLS 222


>AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-PA
            protein.
          Length = 2059

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 115  CTRCRWVDWHIRLQKLNQQAVLEASSMRE 201
            C+R  + DW  + QKL   AVL  SS+RE
Sbjct: 2006 CSRSEYCDWLAKDQKLETPAVLALSSLRE 2034


>AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,
            isoform A protein.
          Length = 1893

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 357  SRSSRGGTAGNCFVSRGRRDLYLRN 431
            SRSS GGT G C +   RRD  + N
Sbjct: 1147 SRSSNGGTIGPCNLKAFRRDFMISN 1171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,786,147
Number of Sequences: 53049
Number of extensions: 666288
Number of successful extensions: 1421
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)