Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3a02
         (540 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   1.6  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   5.0  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   5.0  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   5.0  
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         23   8.7  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 333 PKVLDALQAGASAFKAALEK 392
           PK+L A++ GAS  KA++ K
Sbjct: 407 PKMLHAIKRGASVIKASIPK 426


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 371 STSSG--LQCVQNLRRLLLEHGGQLFNVFLLFGGHFVDN 261
           STS G  + C  +   + L  G  +   FL+FGG F+++
Sbjct: 565 STSFGYLISCASSSISMALSVGPPVVIPFLIFGGFFLNS 603


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 371 STSSG--LQCVQNLRRLLLEHGGQLFNVFLLFGGHFVDN 261
           STS G  + C  +   + L  G  +   FL+FGG F+++
Sbjct: 565 STSFGYLISCASSSISMALSVGPPVVIPFLIFGGFFLNS 603


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 371 STSSG--LQCVQNLRRLLLEHGGQLFNVFLLFGGHFVDN 261
           STS G  + C  +   + L  G  +   FL+FGG F+++
Sbjct: 543 STSFGYLISCASSSISMALSVGPPVVIPFLIFGGFFLNS 581


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 234 NIDXXKLKEVINKMAAEQKKNVEELTTML 320
           NID  K+K+  N+   E  +  E+L T +
Sbjct: 151 NIDIDKIKKEANQYNREADRIAEDLATKM 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,572
Number of Sequences: 2352
Number of extensions: 5905
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)