Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3a02
(540 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125447-3|AAN60502.1| 217|Caenorhabditis elegans Hypothetical ... 30 1.2
AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical ... 30 1.2
U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical pr... 29 2.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.1
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 29 2.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.1
Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical p... 28 4.9
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 4.9
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 4.9
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 27 6.5
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 27 6.5
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 27 6.5
L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical pr... 27 6.5
L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical pr... 27 6.5
L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical pr... 27 6.5
L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 6.5
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 6.5
Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL132876-16|CAD21672.2| 406|Caenorhabditis elegans Hypothetical... 27 8.6
AB096632-1|BAC76732.1| 500|Caenorhabditis elegans methionyl-tRN... 27 8.6
>AF125447-3|AAN60502.1| 217|Caenorhabditis elegans Hypothetical
protein Y14H12B.1b protein.
Length = 217
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 144 KWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLE 323
K M S+ + KA +EK + E P+ + D +E+ N+M E+K+ + + ++E
Sbjct: 66 KEMVASRKSTQKKAKKEKTPEK-EATPEPESPDDSGSEEIDNEMMEEEKQEYKFVYNIVE 124
Query: 324 KQPP 335
+ PP
Sbjct: 125 RVPP 128
>AF125447-2|AAD12808.1| 250|Caenorhabditis elegans Hypothetical
protein Y14H12B.1a protein.
Length = 250
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 144 KWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLE 323
K M S+ + KA +EK + E P+ + D +E+ N+M E+K+ + + ++E
Sbjct: 99 KEMVASRKSTQKKAKKEKTPEK-EATPEPESPDDSGSEEIDNEMMEEEKQEYKFVYNIVE 157
Query: 324 KQPP 335
+ PP
Sbjct: 158 RVPP 161
>U40409-8|AAA81389.1| 156|Caenorhabditis elegans Hypothetical
protein F32A6.1 protein.
Length = 156
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/78 (20%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 87 DQFFEKLQKDGKNSVDNIIKWMKDSKIIDE-VKASEEKARKLFEGVPDINNIDXXKLKEV 263
DQF +L++D K V+N+ + + D+ + + + L + + + L+E+
Sbjct: 44 DQFMAELERDNKRLVENVKELETTVRDCDDRIPELKNELAILLDDKNKMEGVSGENLEEL 103
Query: 264 INKMAAEQKKNVEELTTM 317
++K A ++++ E+ M
Sbjct: 104 LSKAAEKEQRIDTEIEEM 121
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +3
Query: 108 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQ 287
+K + + +K K + ++E AS K K E ++K K + +
Sbjct: 1550 EKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Query: 288 KKNVEELTTMLEKQPPKVLD 347
K VEEL + EK P K D
Sbjct: 1610 KSVVEELKSPKEKSPEKADD 1629
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 141 IKWMKDSKII---DEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELT 311
IKW K+ K I D+ + + K +PD + D + K V+ + LT
Sbjct: 4521 IKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTADSSCALT 4580
Query: 312 TMLEKQPPKVLDALQ 356
L + PK++ L+
Sbjct: 4581 VKLPAKEPKIIKGLE 4595
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +3
Query: 87 DQFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKE-- 260
D E+ + D + N+ + KD + + K E+ RK E + D K KE
Sbjct: 1034 DADIERAEADEQRRKMNVERAKKDEERAKKDKRDAEERRKKDEERAKKDKEDAKKAKEDQ 1093
Query: 261 -VINKMAAEQKKNVEELTTMLEKQ 329
I+K+AAE K+ E+ EK+
Sbjct: 1094 EKIDKLAAEVKEREEKSLARHEKE 1117
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +3
Query: 108 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQ 287
+K + + +K K + ++E AS K K E ++K K + +
Sbjct: 1550 EKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Query: 288 KKNVEELTTMLEKQPPKVLD 347
K VEEL + EK P K D
Sbjct: 1610 KSVVEELKSPKEKSPEKADD 1629
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 141 IKWMKDSKII---DEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELT 311
IKW K+ K I D+ + + K +PD + D + K V+ + LT
Sbjct: 4521 IKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTADSSCALT 4580
Query: 312 TMLEKQPPKVLDALQ 356
L + PK++ L+
Sbjct: 4581 VKLPAKEPKIIKGLE 4595
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +3
Query: 108 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQ 287
+K + + +K K + ++E AS K K E ++K K + +
Sbjct: 1550 EKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Query: 288 KKNVEELTTMLEKQPPKVLD 347
K VEEL + EK P K D
Sbjct: 1610 KSVVEELKSPKEKSPEKADD 1629
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 141 IKWMKDSKII---DEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELT 311
IKW K+ K I D+ + + K +PD + D + K V+ + LT
Sbjct: 4521 IKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTADSSCALT 4580
Query: 312 TMLEKQPPKVLDALQ 356
L + PK++ L+
Sbjct: 4581 VKLPAKEPKIIKGLE 4595
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +3
Query: 108 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQ 287
+K + + +K K + ++E AS K K E ++K K + +
Sbjct: 1550 EKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPE 1609
Query: 288 KKNVEELTTMLEKQPPKVLD 347
K VEEL + EK P K D
Sbjct: 1610 KSVVEELKSPKEKSPEKADD 1629
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 141 IKWMKDSKII---DEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELT 311
IKW K+ K I D+ + + K +PD + D + K V+ + LT
Sbjct: 4521 IKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTADSSCALT 4580
Query: 312 TMLEKQPPKVLDALQ 356
L + PK++ L+
Sbjct: 4581 VKLPAKEPKIIKGLE 4595
>Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical
protein R07B1.8 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/53 (24%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 183 ASEEKARKLFEGVPDINNIDXX-KLKEVINKMAAEQKKNVEELTTMLEKQPPK 338
+++ +A +LF + N+++ ++++ K E ++ V E+ T+ ++QPPK
Sbjct: 341 SAKNEATRLFANKKNNNDVEKSTQIEKKPEKQGPEIQEEVVEMETVKDEQPPK 393
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1592 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1646
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1614 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1668
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1405 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1459
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1712 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1766
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1592 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1646
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1614 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1668
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1405 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1459
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1712 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1766
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1423 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1477
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 186 SEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
SE K + PDI + K + + + + VEE + + EK PP+ + A
Sbjct: 1383 SESKEEEATSSSPDIQRENTVKRRSMDVEREQPEANPVEETSIVKEKTPPRKISA 1437
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 255 KEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASA 371
+EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1201 EEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 255 KEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASA 371
+EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1201 EEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 255 KEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASA 371
+EV+ +M A+ +K +EEL +++ + + A +A +SA
Sbjct: 1201 EEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSA 1239
>L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical
protein F44E2.7b protein.
Length = 379
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 180 KASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQA 359
K EE+ RK D K ++ I E+K+ E+L L+ Q K A Q
Sbjct: 47 KLLEEQRRKAEAEYERKRKADEKKKEKAIKD---EEKRKAEDLRKCLQLQQQKTAAAAQI 103
Query: 360 GASAFKAALEKK 395
+A KAA+ ++
Sbjct: 104 RETAEKAAVARR 115
>L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical
protein F44E2.7c protein.
Length = 411
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 180 KASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQA 359
K EE+ RK D K ++ I E+K+ E+L L+ Q K A Q
Sbjct: 79 KLLEEQRRKAEAEYERKRKADEKKKEKAIKD---EEKRKAEDLRKCLQLQQQKTAAAAQI 135
Query: 360 GASAFKAALEKK 395
+A KAA+ ++
Sbjct: 136 RETAEKAAVARR 147
>L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical
protein F44E2.7a protein.
Length = 471
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 180 KASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQA 359
K EE+ RK D K ++ I E+K+ E+L L+ Q K A Q
Sbjct: 139 KLLEEQRRKAEAEYERKRKADEKKKEKAIKD---EEKRKAEDLRKCLQLQQQKTAAAAQI 195
Query: 360 GASAFKAALEKK 395
+A KAA+ ++
Sbjct: 196 RETAEKAAVARR 207
>L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical
protein F44E2.7d protein.
Length = 469
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 180 KASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDALQA 359
K EE+ RK D K ++ I E+K+ E+L L+ Q K A Q
Sbjct: 137 KLLEEQRRKAEAEYERKRKADEKKKEKAIKD---EEKRKAEDLRKCLQLQQQKTAAAAQI 193
Query: 360 GASAFKAALEKK 395
+A KAA+ ++
Sbjct: 194 RETAEKAAVARR 205
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 141 IKWMKDSKII---DEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELT 311
IKW K+ K I D+ + + K +PD + D + K V+ + LT
Sbjct: 3881 IKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTADSSCALT 3940
Query: 312 TMLEKQPPKVLDALQ 356
L + PK++ L+
Sbjct: 3941 VKLPAKEPKIIKGLE 3955
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 141 IKWMKDSKII---DEVKASEEKARKLFEGVPDINNIDXXKLKEVINKMAAEQKKNVEELT 311
IKW K+ K I D+ + + K +PD + D + K V+ + LT
Sbjct: 3881 IKWYKNGKEITPSDKAQPGSDGDNKPQLVIPDAGDDDAAEYKVVLTDEDGNTADSSCALT 3940
Query: 312 TMLEKQPPKVLDALQ 356
L + PK++ L+
Sbjct: 3941 VKLPAKEPKIIKGLE 3955
>Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical
protein T20F10.2b protein.
Length = 262
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 99 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNI 239
+ L+KDGK++ DN +K+ +E+ A +EKA +L +N++
Sbjct: 94 DTLEKDGKSNTDNY------TKMQEELSALKEKAEELQRNNTALNSL 134
>Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical
protein T20F10.2a protein.
Length = 282
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 99 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNI 239
+ L+KDGK++ DN +K+ +E+ A +EKA +L +N++
Sbjct: 114 DTLEKDGKSNTDNY------TKMQEELSALKEKAEELQRNNTALNSL 154
>AL132876-16|CAD21672.2| 406|Caenorhabditis elegans Hypothetical
protein Y105E8A.20 protein.
Length = 406
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +3
Query: 90 QFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKEVI 266
+ E +++ +N VD + M KII+ + + ++A +LF+ ID +LK ++
Sbjct: 285 KLMEMVEESRENCVD-LYDEMSYFKIIENLMLTMKEANRLFQSSQPWKEIDEKRLKSLL 342
>AB096632-1|BAC76732.1| 500|Caenorhabditis elegans methionyl-tRNA
synthetase (mitochondrial)protein.
Length = 500
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +3
Query: 90 QFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDXXKLKEVI 266
+ E +++ +N VD + M KII+ + + ++A +LF+ ID +LK ++
Sbjct: 379 KLMEMVEESRENCVD-LYDEMSYFKIIENLMLTMKEANRLFQSSQPWKEIDEKRLKSLL 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,108,568
Number of Sequences: 27780
Number of extensions: 146745
Number of successful extensions: 629
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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