Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30p22
         (774 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0133 + 4707944-4708308,4708320-4708534,4708626-4708672,470...    32   0.44 
03_06_0342 + 33268971-33270533                                         29   3.1  
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245...    28   7.2  
01_05_0585 + 23438272-23438586                                         28   7.2  
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907...    28   7.2  
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877...    28   9.5  

>09_02_0133 +
           4707944-4708308,4708320-4708534,4708626-4708672,
           4708997-4709393,4710042-4710608,4710708-4710838,
           4711274-4711747
          Length = 731

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
 Frame = +1

Query: 157 PENFSVCQVTSEDHEAAVDAIKRH--FLSEHV--LVISRNMNVNNDRALDEYLIGLLKQG 324
           PE+  + +  +++  A  D I +H  +L +++  + +SRNM   +D    +YL+ +    
Sbjct: 551 PEHLDIYKYLNDEQRAGFDDITQHRSYLWKNIRKICLSRNMRAQSDPWFSDYLLRIGNGT 610

Query: 325 NTLFAKDDNGSIAGVCVNFASSPVDPKNLRHYAF 426
               A DD      + + ++ +      L  Y F
Sbjct: 611 ENTIADDDVRLPDEIVIGYSDNEDSVNTLIEYVF 644


>03_06_0342 + 33268971-33270533
          Length = 520

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +1

Query: 472 KLQETPNLWDIFKQQKVFEIKMLTVIPEYRRQGLAVMLAEKSKEL 606
           + QE    + +F   +  E+ + T +P  RRQG AVM+  + ++L
Sbjct: 158 RAQENRRYYRLFFLDRHRELVINTYLPSIRRQGRAVMVQNRQRKL 202


>10_08_0104 +
           14824122-14824178,14824274-14824318,14824419-14824536,
           14825522-14825581,14825783-14825891,14825972-14826197,
           14826274-14826390,14826510-14826611
          Length = 277

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +1

Query: 76  YLTNKTYFYSQIRKC-VFGIKDLIHQEKPENFSVCQVTSEDHEAAVDAIKRHFLSEHV 246
           ++  K  +Y+ ++   +F ++    + K E  ++      D +  V+A+K+HF +EH+
Sbjct: 97  WIVGKFAYYTALQASPIFILEGGEERMKMELANIILTKHNDEKTLVEAVKQHFFAEHL 154


>01_05_0585 + 23438272-23438586
          Length = 104

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = -1

Query: 522 HFLLFKYIPQVWRFL*FCNEVQEIFRVWILAIKCVM 415
           +F +F Y  Q   +   C  ++ +  +W+L + C++
Sbjct: 38  YFAVFPYCMQTMLYRGLCTTIEVVLELWVLRLPCLV 73


>01_01_1145 +
           9073973-9074281,9075440-9075998,9076088-9076241,
           9077475-9077565,9077722-9077793,9077879-9078390,
           9078854-9078923,9079514-9079579,9080266-9080570,
           9080872-9081006,9081141-9081204,9081429-9081574,
           9081669-9081773,9082310-9082490
          Length = 922

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 127 GIKDLIHQEKPENFSVCQVTSEDHEAA 207
           G+ ++    KP++ S C + S+ HEAA
Sbjct: 474 GLSNISIDNKPKSISACSLNSQKHEAA 500


>08_01_0892 -
           8778097-8778236,8778390-8778486,8778568-8778747,
           8779138-8779247,8781153-8781294,8782298-8782686,
           8782752-8782834,8783524-8785244,8785894-8786040,
           8786121-8786264,8786669-8786741,8787413-8787633
          Length = 1148

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 278 LFTFIFLEITSTCSLKKCRLIASTAASWSSDVTWQTEKFSGFSW 147
           +F+F+ + + +TCSL  CR I       + +V + + KF   SW
Sbjct: 827 VFSFVCVPVNTTCSLSICREILWFLIG-TREVPFSSVKFGISSW 869


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,512,642
Number of Sequences: 37544
Number of extensions: 424994
Number of successful extensions: 940
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)