Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30p22
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81052-3|CAB02871.1|  160|Caenorhabditis elegans Hypothetical pr...    33   0.30 
U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like ...    31   0.91 
AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to SU...    31   0.91 
Z81527-5|CAB04273.2|  350|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z66521-12|CAA91397.3|  614|Caenorhabditis elegans Hypothetical p...    29   2.8  
U61953-5|AAC48080.2|  297|Caenorhabditis elegans Hypothetical pr...    29   4.9  
U39470-2|AAC71118.1|  862|Caenorhabditis elegans Temporarily ass...    29   4.9  
U53338-5|AAA96193.1|  463|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z81052-3|CAB02871.1|  160|Caenorhabditis elegans Hypothetical
           protein D2023.4 protein.
          Length = 160

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
 Frame = +1

Query: 430 RQDPNTKDFLYFIAKLQETPNLWDIFKQQ------KVFEIKMLTVIPEYRRQGLAVMLAE 591
           R+D   K    FIA + E P   ++F         +   ++ L + P++RR GLA  L +
Sbjct: 42  RKDIENKAVHGFIAFIGEEPAGMNLFYYAYSTWVGQYLHMEDLYIRPQFRRMGLARTLWK 101

Query: 592 KSKELAHDQGYNIVRMD 642
           K  ELA D+G  IVR++
Sbjct: 102 KLAELARDKG--IVRLE 116


>U23412-4|AAK21468.3|  697|Caenorhabditis elegans Ubiquitin-like
           protease protein 1 protein.
          Length = 697

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
 Frame = +1

Query: 148 QEKPENFSVCQVTSEDHEAAVDAIKRHFLSEHVLVISRN----MNVNNDRALDEYLIGLL 315
           +EK E     QV  ED E  V+   R        +I  N    +  N     +E +I   
Sbjct: 65  KEKTEVSGEVQV-QEDDEIIVEGTTRRVAENKKYMIFLNEDAPVRANAGSEENEVIIEKH 123

Query: 316 KQGNTLFAKDDNGS-IAG-VCVNFASSPVDPKNLRHYAFYRQDPNTKDFLYFIAKLQETP 489
            Q N     D+    + G + +  +SSP  PKNL      +QD    D L+   K+ +TP
Sbjct: 124 VQKNVEIRNDEEKQEVQGDLVLTLSSSPKSPKNLEKSFEVQQDDEEPDVLF--EKVVKTP 181

Query: 490 N 492
           N
Sbjct: 182 N 182


>AB095020-1|BAC22612.1|  697|Caenorhabditis elegans similar to
           SUMO-1-specific protease protein.
          Length = 697

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
 Frame = +1

Query: 148 QEKPENFSVCQVTSEDHEAAVDAIKRHFLSEHVLVISRN----MNVNNDRALDEYLIGLL 315
           +EK E     QV  ED E  V+   R        +I  N    +  N     +E +I   
Sbjct: 65  KEKTEVSGEVQV-QEDDEIIVEGTTRRVAENKKYMIFLNEDAPVRANAGSEENEVIIEKH 123

Query: 316 KQGNTLFAKDDNGS-IAG-VCVNFASSPVDPKNLRHYAFYRQDPNTKDFLYFIAKLQETP 489
            Q N     D+    + G + +  +SSP  PKNL      +QD    D L+   K+ +TP
Sbjct: 124 VQKNVEIRNDEEKQEVQGDLVLTLSSSPKSPKNLEKSFEVQQDDEEPDVLF--EKVVKTP 181

Query: 490 N 492
           N
Sbjct: 182 N 182


>Z81527-5|CAB04273.2|  350|Caenorhabditis elegans Hypothetical
           protein F35E12.6 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 538 LTVIPEYRRQGLAVMLAEKSKELAHDQGYNIVRMDCINPY 657
           LT +  YR    +++LA  +  + + + YNI+ +D +NPY
Sbjct: 215 LTFLNLYRTPSNSMLLANDASVIENYEVYNIMVLDSVNPY 254


>Z66521-12|CAA91397.3|  614|Caenorhabditis elegans Hypothetical
           protein W02B12.4 protein.
          Length = 614

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +1

Query: 166 FSVCQVTSEDHEAAVDAIKRHFLSEHVLVIS 258
           FS+  V  + ++A+ DA   HF+S+ ++V++
Sbjct: 141 FSILNVLGDGNDASCDAFAEHFVSKEMIVVT 171


>U61953-5|AAC48080.2|  297|Caenorhabditis elegans Hypothetical
           protein R08C7.4 protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/60 (26%), Positives = 24/60 (40%)
 Frame = -2

Query: 365 PAIEPLSSFANNVFPCFNKPIKYSSRARSLFTFIFLEITSTCSLKKCRLIASTAASWSSD 186
           P I  +S   N V      P+KYSS A+ +   +FL+   T  +          + W  D
Sbjct: 181 PNIGEVSFTTNRVLKTEPVPVKYSSDAQLMEDMLFLKYNKTTEISTLPKHGQKGSEWELD 240


>U39470-2|AAC71118.1|  862|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 127 protein.
          Length = 862

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +1

Query: 31  WKILVMFSLRTKCLRYLTNKTYFYSQIRKCVFGIKDL 141
           W+I+       K LRYL+N +++ + ++ C F +KD+
Sbjct: 137 WEIVTTEFRYIKLLRYLSNLSFYLTDLQNCGF-LKDI 172


>U53338-5|AAA96193.1|  463|Caenorhabditis elegans Hypothetical
           protein C05E11.7 protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = -3

Query: 397 LRDCLQNSRRPLQSSHYHPLQIMCSPASINRLNIRQGHDRC 275
           +R+C  + ++ + +     +  +CSP S+ R N+   H +C
Sbjct: 74  IRECGDDKQKRILNEVSKTIMYLCSPFSLKRQNLVIEHQKC 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,630,797
Number of Sequences: 27780
Number of extensions: 412271
Number of successful extensions: 1174
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)