Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30p18
(762 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061219-1|AAL28767.1| 596|Drosophila melanogaster LD16356p pro... 36 0.060
AF143860-1|AAD31518.1| 596|Drosophila melanogaster RanGAP protein. 36 0.060
AE014134-3098|AAF53801.1| 596|Drosophila melanogaster CG9999-PA... 36 0.060
AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,... 35 0.11
AY118953-1|AAM50813.1| 111|Drosophila melanogaster LD35121p pro... 31 1.7
AE014297-3834|AAF56492.1| 111|Drosophila melanogaster CG5039-PA... 31 1.7
BT023408-1|AAY55824.1| 1585|Drosophila melanogaster AT18603p pro... 29 5.2
AE014134-1126|AAF52412.2| 1585|Drosophila melanogaster CG31635-P... 29 5.2
>AY061219-1|AAL28767.1| 596|Drosophila melanogaster LD16356p
protein.
Length = 596
Score = 35.9 bits (79), Expect = 0.060
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 524 VRCMGIAMKFNNFVKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRL 703
V + + K N ++VLN+ DN L ++ + E L LRE++ C I G
Sbjct: 221 VEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHF 280
Query: 704 LPGL-IVNRSLKVLNLNKNQ 760
L N L+V++L N+
Sbjct: 281 GEALERGNERLEVIDLGFNE 300
>AF143860-1|AAD31518.1| 596|Drosophila melanogaster RanGAP protein.
Length = 596
Score = 35.9 bits (79), Expect = 0.060
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 524 VRCMGIAMKFNNFVKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRL 703
V + + K N ++VLN+ DN L ++ + E L LRE++ C I G
Sbjct: 221 VEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHF 280
Query: 704 LPGL-IVNRSLKVLNLNKNQ 760
L N L+V++L N+
Sbjct: 281 GEALERGNERLEVIDLGFNE 300
>AE014134-3098|AAF53801.1| 596|Drosophila melanogaster CG9999-PA
protein.
Length = 596
Score = 35.9 bits (79), Expect = 0.060
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 524 VRCMGIAMKFNNFVKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRL 703
V + + K N ++VLN+ DN L ++ + E L LRE++ C I G
Sbjct: 221 VEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHF 280
Query: 704 LPGL-IVNRSLKVLNLNKNQ 760
L N L+V++L N+
Sbjct: 281 GEALERGNERLEVIDLGFNE 300
>AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,
isoform B protein.
Length = 1399
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 623 EMLTTNSCLRELNLCGCRIGVEGLRRLLPGLIVNRSLKVLNLN 751
+ T+ L+ LN+ GC++ +E L+ LL GL N S L L+
Sbjct: 391 QFFTSTFSLKHLNIAGCKLPMEALKNLLLGLACNESTAGLYLD 433
>AY118953-1|AAM50813.1| 111|Drosophila melanogaster LD35121p
protein.
Length = 111
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 368 LQPEPPIIYPDDGQVLYLELCKEMG 442
+ PEP I++PDDGQ ++L + +G
Sbjct: 10 ISPEPDILHPDDGQYIWLPISVLVG 34
>AE014297-3834|AAF56492.1| 111|Drosophila melanogaster CG5039-PA
protein.
Length = 111
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 368 LQPEPPIIYPDDGQVLYLELCKEMG 442
+ PEP I++PDDGQ ++L + +G
Sbjct: 10 ISPEPDILHPDDGQYIWLPISVLVG 34
>BT023408-1|AAY55824.1| 1585|Drosophila melanogaster AT18603p protein.
Length = 1585
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 563 VKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRLLPGLIV--NRSLK 736
+++LN+ N L+ND + + LT N+ L L L + +G+ L L N L+
Sbjct: 1028 LELLNIGKNCLSNDFVSTIKDSLTKNTTLTTLGLQSAHLNAKGIETLASILTFGGNSKLQ 1087
Query: 737 VLNLNKNQ 760
+++ N+
Sbjct: 1088 RIDIRDNK 1095
>AE014134-1126|AAF52412.2| 1585|Drosophila melanogaster CG31635-PA
protein.
Length = 1585
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 563 VKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRLLPGLIV--NRSLK 736
+++LN+ N L+ND + + LT N+ L L L + +G+ L L N L+
Sbjct: 1028 LELLNIGKNCLSNDFVSTIKDSLTKNTTLTTLGLQSAHLNAKGIETLASILTFGGNSKLQ 1087
Query: 737 VLNLNKNQ 760
+++ N+
Sbjct: 1088 RIDIRDNK 1095
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,292,693
Number of Sequences: 53049
Number of extensions: 642286
Number of successful extensions: 1400
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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