Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30p18
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical pr... 31 0.89
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 31 0.89
U41105-9|AAL38967.1| 111|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF040653-11|AAB95030.1| 332|Caenorhabditis elegans F-box b prot... 29 4.8
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 8.3
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 542 AMKFNNFVKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRLLPGL 715
A+K N ++ L L DN L H+ +++T+NS L+ L+L IG G+R + GL
Sbjct: 284 ALKNNTGLRELYLGDNGLQPTDGSHIYQLITSNSSLQLLDLRNNSIGDSGVRHICDGL 341
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 485 VIDLRYYGVNPNSVR--CMGIAMKF---NNFVKVLNLTDNFLNNDACYHLGEMLTTNSCL 649
++DLR + + VR C G+ + + + + L +N + + L E L N+ +
Sbjct: 321 LLDLRNNSIGDSGVRHICDGLRHREAVEKSSLSAMVLWNNNVTGASMDSLAEALIENTKI 380
Query: 650 RELNLCGCRIGVEGLRRLLPGLIVNRSLKVLNL 748
LN+ +GVEG+ RL P L N L L L
Sbjct: 381 ETLNIGNNNLGVEGIARLKPALASNSHLHRLGL 413
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 542 AMKFNNFVKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRLLPGL 715
A+K N ++ L L DN L H+ +++T+NS L+ L+L IG G+R + GL
Sbjct: 284 ALKNNTGLRELYLGDNGLQPTDGSHIYQLITSNSSLQLLDLRNNSIGDSGVRHICDGL 341
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 485 VIDLRYYGVNPNSVR--CMGIAMKF---NNFVKVLNLTDNFLNNDACYHLGEMLTTNSCL 649
++DLR + + VR C G+ + + + + L +N + + L E L N+ +
Sbjct: 321 LLDLRNNSIGDSGVRHICDGLRHREAVEKSSLSAMVLWNNNVTGASMDSLAEALIENTKI 380
Query: 650 RELNLCGCRIGVEGLRRLLPGLIVNRSLKVLNL 748
LN+ +GVEG+ RL P L N L L L
Sbjct: 381 ETLNIGNNNLGVEGIARLKPALASNSHLHRLGL 413
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 542 AMKFNNFVKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRLLPGL 715
A+K N ++ L L DN L H+ +++T+NS L+ L+L IG G+R + GL
Sbjct: 284 ALKNNTGLRELYLGDNGLQPTDGSHIYQLITSNSSLQLLDLRNNSIGDSGVRHICDGL 341
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 485 VIDLRYYGVNPNSVR--CMGIAMKF---NNFVKVLNLTDNFLNNDACYHLGEMLTTNSCL 649
++DLR + + VR C G+ + + + + L +N + + L E L N+ +
Sbjct: 321 LLDLRNNSIGDSGVRHICDGLRHREAVEKSSLSAMVLWNNNVTGASMDSLAEALIENTKI 380
Query: 650 RELNLCGCRIGVEGLRRLLPGLIVNRSLKVLNL 748
LN+ +GVEG+ RL P L N L L L
Sbjct: 381 ETLNIGNNNLGVEGIARLKPALASNSHLHRLGL 413
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 542 AMKFNNFVKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRLLPGL 715
A+K N ++ L L DN L H+ +++T+NS L+ L+L IG G+R + GL
Sbjct: 284 ALKNNTGLRELYLGDNGLQPTDGSHIYQLITSNSSLQLLDLRNNSIGDSGVRHICDGL 341
Score = 36.3 bits (80), Expect = 0.024
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 485 VIDLRYYGVNPNSVR--CMGIAMKF---NNFVKVLNLTDNFLNNDACYHLGEMLTTNSCL 649
++DLR + + VR C G+ + + + + L +N + + L E L N+ +
Sbjct: 321 LLDLRNNSIGDSGVRHICDGLRHREAVEKSSLSAMVLWNNNVTGASMDSLAEALIENTKI 380
Query: 650 RELNLCGCRIGVEGLRRLLPGLIVNRSLKVLNL 748
LN+ +GVEG+ RL P L N L L L
Sbjct: 381 ETLNIGNNNLGVEGIARLKPALASNSHLHRLGL 413
>Z71264-1|CAA95828.1| 998|Caenorhabditis elegans Hypothetical
protein K07G5.1 protein.
Length = 998
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 623 EMLTTNSCLRELNLCGCRIGVEGLRRLLPGLIVNRSLKVLNLNKNQ 760
++ + CL ELNL CR+G L L+ L +LK L+++ N+
Sbjct: 545 KLYSEEGCLEELNLSDCRLGAY-LSVLINTLAATTTLKSLDISGNE 589
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +2
Query: 560 FVKVLNLTDNFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRLLPGLIVNRSLKV 739
F V NL NF ND H G ++T NS L+ + +G G L L++N
Sbjct: 151 FENVQNLQVNF-ENDIVVHSGNVITANSTLKRPEITIESVGNGGGFNTL--LMINLDGNA 207
Query: 740 LNLNKN 757
L+L KN
Sbjct: 208 LDLGKN 213
>U41105-9|AAL38967.1| 111|Caenorhabditis elegans Hypothetical
protein T02G5.14 protein.
Length = 111
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 545 MKFNNFVKVLNLTDNFLNNDACYHLGEMLTTNSCL 649
MKFN F+ V N F +N Y L + N+CL
Sbjct: 13 MKFNLFIDVFNFEYLFSDNQRKYILSRLKLFNNCL 47
>AF040653-11|AAB95030.1| 332|Caenorhabditis elegans F-box b protein
protein 46 protein.
Length = 332
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 554 NNFVKVLNLTD----NFLNNDACYHLGEMLTTNSCLRELNLCGCRIGVEGLRRLLPGLI 718
N+F+ ++N + + N A +H + CL++LN+ I G L+P LI
Sbjct: 111 NHFLYIINPSKIDVLEYFENSAEFHEQRFQISVDCLKDLNILKLHINFNGQLELVPKLI 169
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 702 NLRRPSTPMRHPQRFNSRKHEF 637
N RRPS P H Q+ ++HE+
Sbjct: 373 NERRPSVPQYHQQQHQQQQHEY 394
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 702 NLRRPSTPMRHPQRFNSRKHEF 637
N RRPS P H Q+ ++HE+
Sbjct: 373 NERRPSVPQYHQQQHQQQQHEY 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,196,249
Number of Sequences: 27780
Number of extensions: 340045
Number of successful extensions: 810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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