Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30p13
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81593-1|CAB04738.1| 608|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical... 30 1.7
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 30 2.2
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 30 2.2
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 30 2.2
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 29 2.9
AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 29 2.9
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 29 2.9
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 29 2.9
Z67755-9|CAM33504.2| 224|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF156960-1|AAD54945.1| 137|Caenorhabditis elegans NTF2-related ... 29 3.8
AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical... 29 3.8
AC024852-2|AAK66028.1| 137|Caenorhabditis elegans Ntf2-related ... 29 3.8
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 28 6.7
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 28 8.8
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 131 DLTRENSASE-ISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESKKRLQGLRLDLA 304
DL E S + + + DL+ N + + E SV+TY+Q +KKR++ L L+L+
Sbjct: 468 DLDNEKSYKKNLEDLLNDLNQRALNSEMANHLQKEGIQSVETYLQMAKKRIEHLELELS 526
>Z81593-1|CAB04738.1| 608|Caenorhabditis elegans Hypothetical
protein T20B3.1 protein.
Length = 608
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 140 RENSASEISKCIKDLSANNRNL-SLLHKELLEINLSVKTYVQ 262
R+NS+ E S C+ L+ NR++ SL ELL ++ + YV+
Sbjct: 213 RDNSSDESSCCVSKLTTTNRDVWSLNRDELLRVSSANIEYVR 254
>AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical
protein K11D12.9 protein.
Length = 400
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/75 (26%), Positives = 40/75 (53%)
Frame = +2
Query: 128 DDLTRENSASEISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESKKRLQGLRLDLAH 307
D+LT+++S ++ + N + +L+KEL E ++T V ESK ++ ++
Sbjct: 275 DELTKKHS--QLVDLSTEFLPNINAVKMLYKELFESFPQLETNVHESKLSMERRVEEVEE 332
Query: 308 EARSSHQVVELLTEK 352
+ RS ++ + L EK
Sbjct: 333 QLRSRNRDFQRLQEK 347
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 92 AVEDCKMNSTVSDDLTR--ENSASEISKCIKDLSANNRNLSLLHKELLE--INLSVKTYV 259
A+ED ++ R E+ ++ I+ +S++ R EL+E +L ++
Sbjct: 1675 AMEDALAGQRDAEKRARASEDEIKRLTADIQAVSSSKRKAEAERDELIEEVSSLRASSFS 1734
Query: 260 QESKKRLQGLRLDLAHEARSSHQVVELLTEK*QCQQSQ 373
E K+RL+ +DL + EL EK + Q Q
Sbjct: 1735 NEEKRRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQ 1772
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 92 AVEDCKMNSTVSDDLTR--ENSASEISKCIKDLSANNRNLSLLHKELLE--INLSVKTYV 259
A+ED ++ R E+ ++ I+ +S++ R EL+E +L ++
Sbjct: 1675 AMEDALAGQRDAEKRARASEDEIKRLTADIQAVSSSKRKAEAERDELIEEVSSLRASSFS 1734
Query: 260 QESKKRLQGLRLDLAHEARSSHQVVELLTEK*QCQQSQ 373
E K+RL+ +DL + EL EK + Q Q
Sbjct: 1735 NEEKRRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQ 1772
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 92 AVEDCKMNSTVSDDLTR--ENSASEISKCIKDLSANNRNLSLLHKELLE--INLSVKTYV 259
A+ED ++ R E+ ++ I+ +S++ R EL+E +L ++
Sbjct: 1675 AMEDALAGQRDAEKRARASEDEIKRLTADIQAVSSSKRKAEAERDELIEEVSSLRASSFS 1734
Query: 260 QESKKRLQGLRLDLAHEARSSHQVVELLTEK*QCQQSQ 373
E K+RL+ +DL + EL EK + Q Q
Sbjct: 1735 NEEKRRLEAKVIDLEDQLDEEASANELAQEKVRKSQQQ 1772
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 GQKLPSSGRIINRKITMSAKSTTPRKR-NQRITTRLSQENINKCNKSVE 453
G LPSS R+ +++ ++ + S TPR+ N + T++S++ NKS+E
Sbjct: 370 GSGLPSSRRLYDQQRSVLSSSGTPRRTGNNYLVTKMSEQ----MNKSME 414
>AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical
protein H24G06.1d protein.
Length = 669
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 GQKLPSSGRIINRKITMSAKSTTPRKR-NQRITTRLSQENINKCNKSVE 453
G LPSS R+ +++ ++ + S TPR+ N + T++S++ NKS+E
Sbjct: 496 GSGLPSSRRLYDQQRSVLSSSGTPRRTGNNYLVTKMSEQ----MNKSME 540
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 GQKLPSSGRIINRKITMSAKSTTPRKR-NQRITTRLSQENINKCNKSVE 453
G LPSS R+ +++ ++ + S TPR+ N + T++S++ NKS+E
Sbjct: 1428 GSGLPSSRRLYDQQRSVLSSSGTPRRTGNNYLVTKMSEQ----MNKSME 1472
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 GQKLPSSGRIINRKITMSAKSTTPRKR-NQRITTRLSQENINKCNKSVE 453
G LPSS R+ +++ ++ + S TPR+ N + T++S++ NKS+E
Sbjct: 1507 GSGLPSSRRLYDQQRSVLSSSGTPRRTGNNYLVTKMSEQ----MNKSME 1551
>Z67755-9|CAM33504.2| 224|Caenorhabditis elegans Hypothetical
protein F54F7.9 protein.
Length = 224
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -2
Query: 677 FSCLFXIFSILSTDVKSCFEQCISCFKKALTFFLVFIVR 561
F C+ FS ++T+ + C+E+ +S +K+ F L F++R
Sbjct: 119 FECMTLEFSSITTNAQKCYEKMVSNEEKS-QFSLSFLMR 156
>AF156960-1|AAD54945.1| 137|Caenorhabditis elegans NTF2-related
export protein NXT1 protein.
Length = 137
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/86 (19%), Positives = 40/86 (46%)
Frame = +1
Query: 391 NQRITTRLSQENINKCNKSVERQRARTFVTWYKQMIDNERQNLALYLADDAFLEWFGRTI 570
+ + T +++E+ CN+S + F+ Y ++D +R+ + + W G I
Sbjct: 2 SMKTTQEINKEDEELCNES------KKFMDVYYDVMDRKREKIGFLYTQVSNAVWNGNPI 55
Query: 571 KTRKKVSAFLKHDMHCSKHDFTSVES 648
+ F+K + ++HD S+++
Sbjct: 56 NGYDSICEFMK-ALPSTQHDIQSLDA 80
>AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical
protein F33D11.12 protein.
Length = 260
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +2
Query: 38 TLILAFLYHKNIIF*CFTAVE-DCKMNSTVSDDLTRENSASEISKCIKD-LSANN--RNL 205
TL+L FL ++I+F FT+V +++S +D+ T E+ S + +D S NN +NL
Sbjct: 171 TLLLIFLLFESILFAIFTSVMFGTQISSICNDETTIESMRSRNANLDEDERSRNNAWKNL 230
Query: 206 SLL 214
L+
Sbjct: 231 QLV 233
>AC024852-2|AAK66028.1| 137|Caenorhabditis elegans Ntf2-related
export protein protein1, isoform a protein.
Length = 137
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/86 (19%), Positives = 40/86 (46%)
Frame = +1
Query: 391 NQRITTRLSQENINKCNKSVERQRARTFVTWYKQMIDNERQNLALYLADDAFLEWFGRTI 570
+ + T +++E+ CN+S + F+ Y ++D +R+ + + W G I
Sbjct: 2 SMKTTQEINKEDEELCNES------KKFMDVYYDVMDRKREKIGFLYTQVSNAVWNGNPI 55
Query: 571 KTRKKVSAFLKHDMHCSKHDFTSVES 648
+ F+K + ++HD S+++
Sbjct: 56 NGYDSICEFMK-ALPSTQHDIQSLDA 80
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 687 ERRWNFSESSTFPRDKNRKARQKKAKFHCSPEWAE 791
++R + ESS P DK +K Q A H SP+W E
Sbjct: 392 KKRKSQRESSVHP-DKLQKTEQAAASSHQSPKWNE 425
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 218 KELLEINLSVKTYVQESKKRLQGLRLDLAHEARSSHQVVELLTE 349
KELL+IN +K ++ES++ + G+ ++ + ++ L E
Sbjct: 680 KELLQINSKLKEELEESQQTIDGIEIEAEQQYTELTSEIDELCE 723
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,155,484
Number of Sequences: 27780
Number of extensions: 354030
Number of successful extensions: 1077
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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