Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30p11
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81058-5|CAB02921.1| 274|Caenorhabditis elegans Hypothetical pr... 68 6e-12
U61954-12|AAK29807.1| 274|Caenorhabditis elegans Fatty acid elo... 66 3e-11
Z19154-3|CAA79555.1| 291|Caenorhabditis elegans Hypothetical pr... 65 5e-11
AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical ... 61 7e-10
Z68749-1|CAA92960.2| 309|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U41011-5|AAA82288.2| 320|Caenorhabditis elegans Fatty acid elon... 57 1e-08
Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain po... 56 4e-08
U61954-9|AAK29808.1| 286|Caenorhabditis elegans Fatty acid elon... 36 0.024
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical... 29 3.7
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical... 29 3.7
U97189-2|AAC48165.2| 336|Caenorhabditis elegans Serpentine rece... 29 4.8
U28943-4|AAA68358.1| 298|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 8.5
>Z81058-5|CAB02921.1| 274|Caenorhabditis elegans Hypothetical
protein F11E6.5 protein.
Length = 274
Score = 68.1 bits (159), Expect = 6e-12
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Frame = +3
Query: 339 GPKLMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHYDFRCQLVDYSRSPMAM 518
G KLMA+RKPF+L+N L ++N ++FS Y+ L+ +G + + Y ++
Sbjct: 50 GQKLMAHRKPFDLQNTLALWNFGFSLFSGIAAYK-LIPELFGVFMKDGFVASYCQNENYY 108
Query: 519 RMANTCWW---YYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGLKFAPGG 689
A+T +W + SK E DT+F VLRKK V +H HH + V+ + ++
Sbjct: 109 TDASTGFWGWAFVMSKAPELGDTMFLVLRKK--PVIFMHWYHHAL--TFVYAVVTYSEHQ 164
Query: 690 HSTFFAL-LNTFVHIVMYFYYMVAAM 764
++L LN VH VMYFY+ V A+
Sbjct: 165 AWARWSLALNLAVHTVMYFYFAVRAL 190
>U61954-12|AAK29807.1| 274|Caenorhabditis elegans Fatty acid
elongation protein 6 protein.
Length = 274
Score = 66.1 bits (154), Expect = 3e-11
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Frame = +3
Query: 309 VCYAYCAKELGPK-LMANRKPFELRNILVVYNMAQTIFSAW--------IFYEYLMSGWW 461
+ AY G K +M NRKPF+L L ++N IFS + +E+ G++
Sbjct: 36 ISMAYVVVIFGLKAVMTNRKPFDLTGPLNLWNAGLAIFSTLGSLATTFGLLHEFFSRGFF 95
Query: 462 GHYDFRCQLVDYSRSPMAMRMANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHG 641
Y + D+ M W + SK EF DTLF +LRKK + LH HH
Sbjct: 96 ESY---IHIGDFYNGLSGM----FTWLFVLSKVAEFGDTLFIILRKK--PLMFLHWYHH- 145
Query: 642 IMPMSVWFGLKFAPGGHSTFFALLNTFVHIVMYFYYMVAAMG 767
++ M+ F A G +T+ +N VH +MY YYM+ + G
Sbjct: 146 VLTMNYAFMSFEANLGFNTWITWMNFSVHSIMYGYYMLRSFG 187
>Z19154-3|CAA79555.1| 291|Caenorhabditis elegans Hypothetical
protein C40H1.4 protein.
Length = 291
Score = 65.3 bits (152), Expect = 5e-11
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Frame = +3
Query: 345 KLMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHY-DFRCQLVDYSRSPMAMR 521
K M NRKPF L+ L+++N A FS + + Y + + + YS +P +
Sbjct: 71 KFMENRKPFTLKYPLILWNGALAAFSIIATLRFSIDPLRSLYAEGFYKTLCYSCNPTDVA 130
Query: 522 MANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHG-IMPMSVWFGLKFAPGGHST 698
A + + SK E DT+F +LRK+ + LH HH ++ +V G + G
Sbjct: 131 -AFWSFAFALSKIVELGDTMFIILRKRP--LIFLHYYHHAAVLIYTVHSGAEHTAAGR-- 185
Query: 699 FFALLNTFVHIVMYFYYMVAAMG 767
F+ L+N F H +MY YY V+AMG
Sbjct: 186 FYILMNYFAHSLMYTYYTVSAMG 208
>AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical
protein Y53F4B.2 protein.
Length = 286
Score = 61.3 bits (142), Expect = 7e-10
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Frame = +3
Query: 327 AKELGPKLMANRKPFELRNILVVYNMAQTIFS---AWIF-YEYLMSGWW-GHYDFRCQLV 491
A L + M +RKP +R +L+ +N +FS W F E+ + + G D C V
Sbjct: 62 ATNLLQRYMESRKPKSMRPLLLAWNGFLAVFSIMGTWRFGIEFYDAVFRRGFIDSICLAV 121
Query: 492 DYSRSPMAMRMANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGL 671
+ RSP A C + SK EF DT+F VLRK+ V LH HH ++ + W
Sbjct: 122 N-PRSPSAFW---ACM-FALSKIAEFGDTMFLVLRKRP--VIFLHWYHHAVVLILSWHAA 174
Query: 672 --KFAPGGHSTFFALLNTFVHIVMYFYYMVAAMG 767
APG +F +N VH +MY YY + ++G
Sbjct: 175 IELTAPG---RWFIFMNYLVHSIMYTYYAITSIG 205
>Z68749-1|CAA92960.2| 309|Caenorhabditis elegans Hypothetical
protein F56H11.3 protein.
Length = 309
Score = 59.7 bits (138), Expect = 2e-09
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Frame = +3
Query: 345 KLMANRKPFELRNILVVYNMAQTIFS---AWIFYEYLMSG--WWGHYDFRCQLVDYSRSP 509
+ M +R+PF+L L ++N ++FS +W + +++ +G Y C+ + S
Sbjct: 85 RFMRDREPFQLTTALRLWNFFLSVFSIYGSWTMFPFMVQQIRLYGLYGCGCEALSNLPSQ 144
Query: 510 MAMRMANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGLKF-APG 686
+ T SK EF+DT F VLRKK + LH HH M V+F + P
Sbjct: 145 AEYWLFLTI----LSKAVEFVDTFFLVLRKK--PLIFLHWYHH--MATFVFFCSNYPTPS 196
Query: 687 GHSTFFALLNTFVHIVMYFYYMVAAM 764
S ++N FVH MY YY +M
Sbjct: 197 SQSRVGVIVNLFVHAFMYPYYFTRSM 222
>U41011-5|AAA82288.2| 320|Caenorhabditis elegans Fatty acid
elongation protein 3 protein.
Length = 320
Score = 57.2 bits (132), Expect = 1e-08
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 4/167 (2%)
Frame = +3
Query: 276 MSSPW-PTLAACVCYAYCAKELGPKLMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMS 452
M + W ++ A V Y G K+M KPF+L L V+N IFS F
Sbjct: 34 MQNHWYQSITASVVYV-AVIFTGKKIMEKYKPFQLDTPLFVWNSFLAIFSILGFLRMTPE 92
Query: 453 GWWGHYDFRCQLVDYSRSPMAMRMANTCWW---YYFSKFTEFMDTLFFVLRKKNEHVSTL 623
W + YS + T +W + SK E +DT+F VLRK+ + L
Sbjct: 93 FVWS-WSAEGNSFKYSICHSSYAQGVTGFWTEQFAMSKLFELIDTIFIVLRKR--PLIFL 149
Query: 624 HVIHHGIMPMSVWFGLKFAPGGHSTFFALLNTFVHIVMYFYYMVAAM 764
H HH + + W K +F +N VH +MY YY + ++
Sbjct: 150 HWYHHVTVMIYTWHAYKDHTAS-GRWFIWMNYGVHALMYSYYALRSL 195
>Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical
protein F56H11.4 protein.
Length = 288
Score = 55.6 bits (128), Expect = 4e-08
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Frame = +3
Query: 321 YCAKELGPK-LMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHYDFRCQLVDY 497
Y G K M NR+PF+L L ++N FS + + ++G + + Y
Sbjct: 54 YMVVVFGTKWFMRNRQPFQLTIPLNIWNFILAAFSIAGAVK-MTPEFFGTIANKGIVASY 112
Query: 498 SRSPMAMRMANTCWWYYF--SKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGL 671
+ + N W + F SK E +DT+F VLRK+ + LH HH + + W+
Sbjct: 113 CKVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRKR--PLMFLHWYHHILTMIYAWYSH 170
Query: 672 KFAPGGHSTFFALLNTFVHIVMYFYYMVAAM 764
P G + + LN VH MY YY + +M
Sbjct: 171 PLTP-GFNRYGIYLNFVVHAFMYSYYFLRSM 200
>AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain
polyunsaturated fattyacid elongation enzyme protein.
Length = 288
Score = 55.6 bits (128), Expect = 4e-08
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Frame = +3
Query: 321 YCAKELGPK-LMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHYDFRCQLVDY 497
Y G K M NR+PF+L L ++N FS + + ++G + + Y
Sbjct: 54 YMVVVFGTKWFMRNRQPFQLTIPLNIWNFILAAFSIAGAVK-MTPEFFGTIANKGIVASY 112
Query: 498 SRSPMAMRMANTCWWYYF--SKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGL 671
+ + N W + F SK E +DT+F VLRK+ + LH HH + + W+
Sbjct: 113 CKVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRKR--PLMFLHWYHHILTMIYAWYSH 170
Query: 672 KFAPGGHSTFFALLNTFVHIVMYFYYMVAAM 764
P G + + LN VH MY YY + +M
Sbjct: 171 PLTP-GFNRYGIYLNFVVHAFMYSYYFLRSM 200
>U61954-9|AAK29808.1| 286|Caenorhabditis elegans Fatty acid
elongation protein 5 protein.
Length = 286
Score = 36.3 bits (80), Expect = 0.024
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Frame = +3
Query: 300 AACVCYAYCAKELGPKL-MANRKPFELRNILVVYNMAQTIFS--AWIF-YEYLMS----- 452
+A + Y A G K M +RK F+L L ++N + FS ++F + L+S
Sbjct: 38 SAKLAVGYIATIFGLKYYMKDRKAFDLSTPLNIWNGILSTFSLLGFLFTFPTLLSVIRKD 97
Query: 453 GWWGHYDFRCQLVDYSRSPMAMRMANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVI 632
G+ Y +L S S + + + SK E +DT+F VLRK+ + +H
Sbjct: 98 GFSHTYSHVSELYTDSTSGYWIFL------WVISKIPELLDTVFIVLRKR--PLIFMHWY 149
Query: 633 HHGIMPMSVWFGLKFAPGGHSTFFALLNTFVHIVMYFYYMVAAM 764
HH + H + +N +H MY YY++ ++
Sbjct: 150 HHALTGYYA-LVCYHEDAVHMVWVVWMNYIIHAFMYGYYLLKSL 192
>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
protein Y105E8A.23b protein.
Length = 1156
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 231 LMDSRGDPR--VKDWPMMSSPWPTLAACV 311
++DS DP K W PW TLAACV
Sbjct: 782 MLDSARDPLNGQKWWMSSDEPWQTLAACV 810
>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
protein Y105E8A.23a protein.
Length = 1138
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 231 LMDSRGDPR--VKDWPMMSSPWPTLAACV 311
++DS DP K W PW TLAACV
Sbjct: 782 MLDSARDPLNGQKWWMSSDEPWQTLAACV 810
>U97189-2|AAC48165.2| 336|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 15 protein.
Length = 336
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 690 HSTFFALLNTFVHIVMYFYYMVAAM 764
HST FA+ F H++++ +Y++ M
Sbjct: 231 HSTKFAVFVVFCHVILFGFYVIGIM 255
>U28943-4|AAA68358.1| 298|Caenorhabditis elegans Hypothetical
protein E04F6.3 protein.
Length = 298
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 491 YQLTPKVIVAPPSAHQILVEYPGAEDSLSHVVNDE 387
+++ P IVAP L+++PG E L V++ E
Sbjct: 48 FKVLPSYIVAPGFQAHTLMDWPGVEFDLQRVLHGE 82
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -3
Query: 764 HGSHHVVKVHYDVNERVEQSEESAVTTRREFKSEPNRHRHDPVMYHMQRGHV 609
H H VK H+ E S S+ ++ SE +H H H + HV
Sbjct: 236 HHKKHAVKKHHKKAESSSSSSSSSSSSSSSSSSEDEKHHHKK---HAAKKHV 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,313,274
Number of Sequences: 27780
Number of extensions: 392883
Number of successful extensions: 1149
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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