Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30p05
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 34 0.100
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 33 0.17
U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical pr... 32 0.53
U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical pr... 32 0.53
AC084158-19|AAK68582.1| 120|Caenorhabditis elegans Hypothetical... 31 1.2
AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical... 30 1.6
AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical ... 29 2.8
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.7
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.7
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 29 3.7
AF038614-2|AAB92061.2| 321|Caenorhabditis elegans Serpentine re... 29 3.7
U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical pr... 29 5.0
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 34.3 bits (75), Expect = 0.100
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +3
Query: 516 KNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQEVKNMKSKMSLNR 695
K +IE ++E + DTI++V+ ++ N EI + + TKQ V +
Sbjct: 225 KTHFNNIEAEMEKISDTIALVKDAGTRLDFLNNEIEEHDRIVFQTKQPVTKANFVFASQD 284
Query: 696 N---RDNDGTAREPLL-GDDSPMNFG 761
D +AREPLL G P N G
Sbjct: 285 PVLVADRKQSAREPLLIGVYDPKNRG 310
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 551 FQIPFNAAQCIFQFSRSPFYFWTTCNYWSLTN 456
FQ PF+ Q F ++++PFY T NYW N
Sbjct: 437 FQQPFHQQQQQFYYTQAPFYGQQTQNYWGQQN 468
>U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical
protein R08E3.3a protein.
Length = 455
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 489 EVEWTSTELKNALRSIEWDL-EDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQEVK 665
+ E + EL+N L + +L E L+D + V+K K NK++ + IE TKQ
Sbjct: 251 QFEEQNRELENKLSKYKPELIEALDDPEAYVQKLMGKIAELNKQMEEDTQIIENTKQ--A 308
Query: 666 NMKSKMSLNRNRDNDGTAREPL 731
N + K+ + N GT E +
Sbjct: 309 NAQKKLQMREELKNLGTDDEEI 330
>U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical
protein R08E3.3b protein.
Length = 516
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 489 EVEWTSTELKNALRSIEWDL-EDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQEVK 665
+ E + EL+N L + +L E L+D + V+K K NK++ + IE TKQ
Sbjct: 251 QFEEQNRELENKLSKYKPELIEALDDPEAYVQKLMGKIAELNKQMEEDTQIIENTKQ--A 308
Query: 666 NMKSKMSLNRNRDNDGTAREPL 731
N + K+ + N GT E +
Sbjct: 309 NAQKKLQMREELKNLGTDDEEI 330
>AC084158-19|AAK68582.1| 120|Caenorhabditis elegans Hypothetical
protein Y69A2AR.8 protein.
Length = 120
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +3
Query: 540 WDLEDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQEVKNMKSKMSLNRNRDNDGTA 719
+++ D+ + +E ++S F +D + + + +K+ K+ KSK S + ++N
Sbjct: 33 YEMYDIGSDVDDIELDTS-FMVDPSTMTEEEA-TKKSKKSKKSSKSKKSTDSKKENKDQK 90
Query: 720 REPLLGDDSPMNFG 761
EP G+D G
Sbjct: 91 EEPKKGEDEKTKEG 104
>AL132948-43|CAB61061.2| 511|Caenorhabditis elegans Hypothetical
protein Y39B6A.41 protein.
Length = 511
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -1
Query: 272 NSQQTLLRFTPQ*PHTINLLPPRCLPSFRVQFWFCHFFYSRTCIAA 135
N + T+ +FT P I +L P+ R QF F F + TC AA
Sbjct: 399 NIRATVSQFTQVPPIGIAVLEVFMFPTLRSQFGFTMFLFLATCCAA 444
>AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical
protein Y113G7A.3 protein.
Length = 821
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 218 LLPPRCLPSFRVQFWFCHFFYSRTCIAAQYIAV 120
+L P C +R + W C F +R A Y A+
Sbjct: 73 ILNPLCAVDYRAKIWMCPFCNNRNPFPAHYAAI 105
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 489 EVEWTSTELKNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRT 635
++E EL+ R W L+ ++ I+++N + + +NK + +RT
Sbjct: 873 QLEQAQHELEKKKREYMWKLQQKDEFYEIMDRNVKETEKENKRLLRKRT 921
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 489 EVEWTSTELKNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKEICDRRT 635
++E EL+ R W L+ ++ I+++N + + +NK + +RT
Sbjct: 873 QLEQAQHELEKKKREYMWKLQQKDEFYEIMDRNVKETEKENKRLLRKRT 921
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 510 ELKNALRSIEWD----LEDLEDTISIVEKNSSKFKIDNKEICDRRTFIEATKQEVKNMKS 677
E+KN +RS D + EDT++ +E K + K+ + +E TK+EV+ K
Sbjct: 683 EVKNVIRSDYTDCLNKVRKAEDTLAKIENKYKKESEEVKKTGKNKDKVEKTKEEVEKAKE 742
Query: 678 K 680
+
Sbjct: 743 E 743
>AF038614-2|AAB92061.2| 321|Caenorhabditis elegans Serpentine
receptor, class v protein4 protein.
Length = 321
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -2
Query: 535 MLRSAFFNSVEVHSTSGLLAIIGVLQISCQRRYKPRVLFSALN 407
+ +S+FF + +H+ + LL + V ++ R+Y+ LF A N
Sbjct: 42 VFKSSFFLIIRMHAITDLLMFLYVELVARPRKYRVHNLFEAAN 84
>U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical
protein T05A12.3 protein.
Length = 655
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 585 NSSKFKIDNKEICDRRTFIEATKQEV--KNMKSKMSLNRNRDNDG 713
+SSK D K + R E +Q++ K K K ++NR RD+ G
Sbjct: 499 SSSKSNGDTKRSYEARRMAELREQQMREKERKKKKAMNRERDSRG 543
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 510 ELKNALRSIEWDLEDLEDTISIVEKNSSKFKIDNKE---ICDRRTFIEATKQEVKNMKSK 680
E+K + E DL D++ T+S K K K+D K+ ++ E K++ K + +
Sbjct: 85 EVKKEKKKSEDDLLDVKKTVS---KEDDKKKVDKKDGSKKLSKKKLKEEKKEKSKKVNKE 141
Query: 681 MSLNRNRDNDGTAREP 728
+++ +D +P
Sbjct: 142 KKISKTESDDEDNEQP 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,993,841
Number of Sequences: 27780
Number of extensions: 339788
Number of successful extensions: 1009
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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