Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30p01
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016452-12|AAB66011.1|  309|Caenorhabditis elegans Hypothetical...   146   2e-35
AF016452-13|AAB66010.1|  303|Caenorhabditis elegans Hypothetical...   128   6e-30
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81506-3|CAB04130.1|  197|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z70780-17|CAA94830.3|  264|Caenorhabditis elegans Hypothetical p...    28   8.4  
Z70754-11|CAA94780.3|  264|Caenorhabditis elegans Hypothetical p...    28   8.4  

>AF016452-12|AAB66011.1|  309|Caenorhabditis elegans Hypothetical
           protein T05H4.5 protein.
          Length = 309

 Score =  146 bits (354), Expect = 2e-35
 Identities = 61/100 (61%), Positives = 79/100 (79%)
 Frame = +3

Query: 6   TELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDH 185
           T+++LLFANQ+EDDIL R EL+   +EHP++F+VWYT+DRP   W YSSGFIND MI+++
Sbjct: 210 TQIRLLFANQTEDDILCRQELDDLAKEHPTRFRVWYTVDRPPVMWSYSSGFINDSMIKEN 269

Query: 186 LFPPSNDVLVLMCGPPPMINFACNPALDKLGFKPDQRFAY 305
           LFPP +D  VL+CGPPPMINFAC P L+KL + P  R  +
Sbjct: 270 LFPPGDDSAVLLCGPPPMINFACIPNLEKLEYDPANRLLF 309


>AF016452-13|AAB66010.1|  303|Caenorhabditis elegans Hypothetical
           protein T05H4.4 protein.
          Length = 303

 Score =  128 bits (308), Expect = 6e-30
 Identities = 52/91 (57%), Positives = 72/91 (79%)
 Frame = +3

Query: 6   TELKLLFANQSEDDILLRDELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDH 185
           T+++LLFANQ+EDDIL R EL+    +HP++F+VWYT+ + +  W+YS+G IN+EMI++H
Sbjct: 204 TQIRLLFANQTEDDILCRKELDELAEKHPTRFRVWYTVSKASKDWRYSTGHINEEMIKEH 263

Query: 186 LFPPSNDVLVLMCGPPPMINFACNPALDKLG 278
           LFP + +  VL+CGPP MIN AC P LDKLG
Sbjct: 264 LFPSNEESAVLLCGPPAMINCACIPNLDKLG 294


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 706 LNKNNNFVFPLMCTPSDGFLC 644
           L  NNNF  PL CTP D   C
Sbjct: 26  LTSNNNFNQPLTCTPQDPCSC 46


>Z81506-3|CAB04130.1|  197|Caenorhabditis elegans Hypothetical
           protein F16H6.4 protein.
          Length = 197

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 578 DFVVPQSINKRPKLLYKINLKQTKESVRRGTHQRKNKIVIF 700
           +F + QS  K  ++  KI+ ++ + ++  G+H +KN + IF
Sbjct: 61  NFKMEQSYEKVDEIPEKIDAERIRYAIHLGSHSQKNVLQIF 101


>Z70780-17|CAA94830.3|  264|Caenorhabditis elegans Hypothetical
           protein F58E6.10 protein.
          Length = 264

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 9   ELKLLFANQSEDDILLRDELERYQREHPSQFQVWY 113
           EL   F      DI +R+EL R  + + ++ QVW+
Sbjct: 99  ELDAAFQKSHYPDIYVREELARITKLNEARIQVWF 133


>Z70754-11|CAA94780.3|  264|Caenorhabditis elegans Hypothetical
           protein F58E6.10 protein.
          Length = 264

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 9   ELKLLFANQSEDDILLRDELERYQREHPSQFQVWY 113
           EL   F      DI +R+EL R  + + ++ QVW+
Sbjct: 99  ELDAAFQKSHYPDIYVREELARITKLNEARIQVWF 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,651,651
Number of Sequences: 27780
Number of extensions: 380160
Number of successful extensions: 790
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)