Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30o17
         (715 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0428 + 3274248-3274847                                           30   2.1  
09_04_0162 + 15245354-15245458,15245558-15245629,15245793-152466...    29   3.7  
09_02_0607 - 11183382-11183387,11183481-11183637,11184220-111842...    29   3.7  
09_04_0097 - 14573499-14574110,14574977-14575017,14575424-145756...    29   4.8  
12_02_0127 + 13961726-13961947,13962050-13962121,13962288-139630...    28   8.5  
05_02_0004 - 5528713-5528718,5529039-5529390,5529802-5530339,553...    28   8.5  
02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227     28   8.5  

>07_01_0428 + 3274248-3274847
          Length = 199

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +3

Query: 504 VMEPRIKNSGLWQGRLVKRGRIPKNDAGECWH----WKDLDIGKD 626
           V+E +  N   W+ RL KRG     D G+ WH    W +L+  +D
Sbjct: 109 VVECQPGNEEEWRRRLEKRGAAVPEDGGDGWHKPKTWTELERLRD 153


>09_04_0162 +
           15245354-15245458,15245558-15245629,15245793-15246617,
           15247787-15248474,15248805-15248821
          Length = 568

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 19/83 (22%), Positives = 41/83 (49%)
 Frame = +3

Query: 432 ENPDENYRVRVVNIVYFLEDDSMTVMEPRIKNSGLWQGRLVKRGRIPKNDAGECWHWKDL 611
           ENPD+N+    +NI  FLE++S+T ++   + +       + +    +N+A + ++    
Sbjct: 200 ENPDQNFSEEDINI--FLENESVTAVQRGGQEANSAHVPSINKVFADENEAFDFYNGYAY 257

Query: 612 DIGKDICIYGKVFHTVSCDLFTK 680
            +G   C     +H+   D+ T+
Sbjct: 258 MVGFSTC-KASNYHSRKTDIVTR 279


>09_02_0607 -
           11183382-11183387,11183481-11183637,11184220-11184284,
           11184397-11184469,11184759-11184905,11185515-11185562,
           11185637-11185716,11186112-11186439,11186525-11186576,
           11187397-11187523,11187613-11187990
          Length = 486

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -1

Query: 601 QCQHSPASFF-GIL-PLFTKRPCHKPEFLILGSM 506
           +C + PA+FF GIL PL  +R C   E +I+GS+
Sbjct: 277 KCLYKPAAFFKGILLPLCQERNCTLREAVIIGSI 310


>09_04_0097 -
           14573499-14574110,14574977-14575017,14575424-14575616,
           14575697-14575837,14575970-14576197,14576297-14576552,
           14576866-14577069,14577157-14577245,14577346-14577416,
           14577498-14577579,14577653-14577715,14578018-14578155
          Length = 705

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -3

Query: 572 WNPTSFYQTTLP*TRILNSGFHDCHRIIFEEVNNIDHSYSIVFIRIFKHWL 420
           W+   +Y T +  TRI  +  H       E V+ I  SY I  I  F H L
Sbjct: 179 WSTREYYGTGIRATRIKTAPVHASASWYLENVSPILQSYGIAAIAPFSHRL 229


>12_02_0127 +
           13961726-13961947,13962050-13962121,13962288-13963058,
           13963401-13963573,13963973-13964083,13964114-13964460,
           13964627-13964652
          Length = 573

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +3

Query: 432 ENPDENYRVRVVNIVYFLEDDSMTVME 512
           ENPD+N+    +NI  FLE++S+ V++
Sbjct: 239 ENPDQNFSEEDINI--FLENESVAVVQ 263


>05_02_0004 -
           5528713-5528718,5529039-5529390,5529802-5530339,
           5530354-5531731,5531895-5532015,5534226-5534545
          Length = 904

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 18/83 (21%), Positives = 40/83 (48%)
 Frame = +3

Query: 432 ENPDENYRVRVVNIVYFLEDDSMTVMEPRIKNSGLWQGRLVKRGRIPKNDAGECWHWKDL 611
           ENPD+N+    +NI  FLE++S+  ++   + +       + +    +N+A + ++    
Sbjct: 288 ENPDQNFSEEDINI--FLENESVAAVQRGGQEANSAHAPSINKVFADENEAFDFYNGYAY 345

Query: 612 DIGKDICIYGKVFHTVSCDLFTK 680
            +G   C     +H+   D+ T+
Sbjct: 346 MVGFSTC-KASNYHSRKTDVVTR 367


>02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227
          Length = 1000

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 620 TNIEILPVPAFAGVILWNPTSFYQTTLP*TRILNSGFHDCHRI 492
           T+++ L +  + G  L  P  FY   LP  + L   FHDCHR+
Sbjct: 609 TSLKCLTLYGYLGQSL--PNWFYPHNLPSLKSLE--FHDCHRL 647


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,564,470
Number of Sequences: 37544
Number of extensions: 463387
Number of successful extensions: 1088
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)