Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30o15
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 31 2.8
X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein. 31 4.9
BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein. 31 4.9
AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor ... 31 4.9
AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein. 31 4.9
U66559-1|AAC51104.1| 1620|Homo sapiens anaplastic lymphoma kinas... 30 6.5
U62540-1|AAB71619.1| 1620|Homo sapiens anaplastic lymphoma kinas... 30 6.5
U04946-1|AAA58698.1| 680|Homo sapiens nucleophosmin-anaplastic ... 30 6.5
D45915-1|BAA08343.1| 680|Homo sapiens p80 protein protein. 30 6.5
AF390893-1|AAM17922.1| 803|Homo sapiens TRK-fused gene/anaplast... 30 6.5
AF143407-1|AAF27292.1| 756|Homo sapiens TRK-fused gene/anaplast... 30 6.5
AF125093-1|AAF42734.1| 701|Homo sapiens TRK-fused gene-anaplast... 30 6.5
AC074096-1|AAY15027.1| 1192|Homo sapiens unknown protein. 30 6.5
AB275889-1|BAF73612.1| 1310|Homo sapiens EML4-ALK variant 2 prot... 30 6.5
AB274722-1|BAF73611.1| 1059|Homo sapiens EML4-ALK variant 1 prot... 30 6.5
AB209477-1|BAD92714.1| 1626|Homo sapiens anaplastic lymphoma kin... 30 6.5
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 31.5 bits (68), Expect = 2.8
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +3
Query: 117 FISTMGDEEQATLDNQFIEFSKLFENKRDGTTITLYQSDFWFRQAKVLDDRRITTIDTGV 296
FI T GDE+QA ++F +FS L +T+ S + F + VL + +T D V
Sbjct: 193 FIRTGGDEQQALCTDEFSDFSPLTGGNVAFSTLEGRPSAYNFDNSPVLQE-WVTATDIRV 251
Query: 297 IFNK 308
N+
Sbjct: 252 TLNR 255
>X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein.
Length = 2135
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -3
Query: 664 VPHIPRETSDSYPSILIEITSKIQSRVFLLSQASYGLSGRVATRIVIHSLYAY 506
+P R Y I + + Q +L++ S+ SG + R+ +H LY Y
Sbjct: 2042 IPRYKRMVERYYADIRQTVPASDQEMNSVLAELSWNYSGDLGARVALHELYKY 2094
>BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein.
Length = 2135
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -3
Query: 664 VPHIPRETSDSYPSILIEITSKIQSRVFLLSQASYGLSGRVATRIVIHSLYAY 506
+P R Y I + + Q +L++ S+ SG + R+ +H LY Y
Sbjct: 2042 IPRYKRMVERYYADIRQTVPASDQEMNSVLAELSWNYSGDLGARVALHELYKY 2094
>AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor
protein.
Length = 1952
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -3
Query: 664 VPHIPRETSDSYPSILIEITSKIQSRVFLLSQASYGLSGRVATRIVIHSLYAY 506
+P R Y I + + Q +L++ S+ SG + R+ +H LY Y
Sbjct: 1859 IPRYKRMVERYYADIRQTVPASDQEMNSVLAELSWNYSGDLGARVALHELYKY 1911
>AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein.
Length = 2143
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -3
Query: 664 VPHIPRETSDSYPSILIEITSKIQSRVFLLSQASYGLSGRVATRIVIHSLYAY 506
+P R Y I + + Q +L++ S+ SG + R+ +H LY Y
Sbjct: 2050 IPRYKRMVERYYADIRQTVPASDQEMNSVLAELSWNYSGDLGARVALHELYKY 2102
>U66559-1|AAC51104.1| 1620|Homo sapiens anaplastic lymphoma kinase
receptor protein.
Length = 1620
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 1462 SVRVPRGPAVEGGHVNMAFSQSNPPSELHRVHGSRNKPTSLWN 1504
>U62540-1|AAB71619.1| 1620|Homo sapiens anaplastic lymphoma kinase
protein.
Length = 1620
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 1462 SVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWN 1504
>U04946-1|AAA58698.1| 680|Homo sapiens nucleophosmin-anaplastic
lymphoma kinase fusion protein protein.
Length = 680
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 522 SVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWN 564
>D45915-1|BAA08343.1| 680|Homo sapiens p80 protein protein.
Length = 680
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 522 SVRVPRGPAVEGGHVNMAFSQSNPPSELHRVHGSRNKPTSLWN 564
>AF390893-1|AAM17922.1| 803|Homo sapiens TRK-fused gene/anaplastic
large cell lymphoma kinase extra long form protein.
Length = 803
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 645 SVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWN 687
>AF143407-1|AAF27292.1| 756|Homo sapiens TRK-fused gene/anaplastic
lymphoma kinase (Ki-1) fusion protein long form protein.
Length = 756
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 598 SVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWN 640
>AF125093-1|AAF42734.1| 701|Homo sapiens TRK-fused gene-anaplastic
lymphoma kinase fusion protein protein.
Length = 701
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 543 SVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWN 585
>AC074096-1|AAY15027.1| 1192|Homo sapiens unknown protein.
Length = 1192
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 1034 SVRVPRGPAVEGGHVNMAFSQSNPPSELHKVHGSRNKPTSLWN 1076
>AB275889-1|BAF73612.1| 1310|Homo sapiens EML4-ALK variant 2 protein.
Length = 1310
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 1152 SVRVPRGPAVEGGHVNMAFSQSNPPSELHRVHGSRNKPTSLWN 1194
>AB274722-1|BAF73611.1| 1059|Homo sapiens EML4-ALK variant 1 protein.
Length = 1059
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 901 SVRVPRGPAVEGGHVNMAFSQSNPPSELHRVHGSRNKPTSLWN 943
>AB209477-1|BAD92714.1| 1626|Homo sapiens anaplastic lymphoma kinase
Ki-1 variant protein.
Length = 1626
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 518 AVRVPREPG*RAIHSQSVFSRESKPAQWQATHAFSCFDNELWN 390
+VRVPR P H FS+ + P++ H LWN
Sbjct: 1468 SVRVPRGPAVEGGHVNMAFSQSNPPSELHRVHGSRNKPTSLWN 1510
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,306,563
Number of Sequences: 237096
Number of extensions: 1841916
Number of successful extensions: 3695
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3691
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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