Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30o13
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3480|AAF56247.3|  306|Drosophila melanogaster CG6182-PA...   135   7e-32
AY119593-1|AAM50247.1|  261|Drosophila melanogaster LD17019p pro...    89   6e-18
AY052062-1|AAK93486.1|  399|Drosophila melanogaster LP10120p pro...    31   1.7  
AE014296-3372|AAF51606.1|  399|Drosophila melanogaster CG5932-PA...    31   1.7  
AY058292-1|AAL13521.1|  520|Drosophila melanogaster GH05422p pro...    30   4.0  
AE014134-404|AAF51259.1|  520|Drosophila melanogaster CG9867-PA ...    30   4.0  

>AE014297-3480|AAF56247.3|  306|Drosophila melanogaster CG6182-PA
           protein.
          Length = 306

 Score =  135 bits (326), Expect = 7e-32
 Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 8/226 (3%)
 Frame = +1

Query: 115 TDERNFRSSYYEKVGCRGVEEKKTLEILMKEKPWDRVKLKQFCLRFTVFADYRNLVWKVL 294
           TDERNFRS YYEK     VEE+K+L  L+++   +  KLKQFC+ +TV  + R+ +W ++
Sbjct: 3   TDERNFRSIYYEKCQINSVEEQKSLNKLLQDDIRNLSKLKQFCMNYTVPNNNRSYLWALV 62

Query: 295 LDILPVYPDSYEYVMKQRTEQYQDLLYAVEKLQLIEPSE-----IYDGSGTPQSKVFLEM 459
           + ILP++  S  YV  QR E Y+DL  AV  L+  +  +     ++      +++V   M
Sbjct: 63  MGILPLHKASTAYVRDQRREMYEDLRRAVTVLRFTDHKQKEQPFMWLIDHKKKAQVMHTM 122

Query: 460 WVLE-NEEWKPPIFPETNFNSADTFLPIAKTLRELYDDPVDVYWFSKRFTEVVKNMQKDL 636
           W++E N  W          +    F+ I +TL +++DD V+ YW +K F +  + ++K+ 
Sbjct: 123 WLIESNRLWHGNTSASLQADDMH-FIEIVRTLLQIFDDNVETYWIAKGFYKYTRELKKEC 181

Query: 637 NKLKEAFYNMLDKQDGELYIYLQDINALE--VIPLVNWFNCCFAGI 768
            KLKE   N+L ++D  L  +L+ +   +     L NW+  CFAGI
Sbjct: 182 VKLKEQTQNILKREDLSLLNHLELLGLFDGNSTLLDNWYITCFAGI 227


>AY119593-1|AAM50247.1|  261|Drosophila melanogaster LD17019p
           protein.
          Length = 261

 Score = 89.0 bits (211), Expect = 6e-18
 Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
 Frame = +1

Query: 244 LRFTVFADYRNLVWKVLLDILPVYPDSYEYVMKQRTEQYQDLLYAVEKLQLIEPSE---- 411
           + +TV  + R+ +W +++ ILP++  S  YV  QR E Y+DL  AV  L+  +  +    
Sbjct: 1   MNYTVPNNNRSYLWALVMGILPLHKASTAYVRDQRREMYEDLRRAVTVLRFTDHKQKEQP 60

Query: 412 -IYDGSGTPQSKVFLEMWVLE-NEEWKPPIFPETNFNSADTFLPIAKTLRELYDDPVDVY 585
            ++      +++V   MW++E N  W          +    F+ I +TL +++DD V+ Y
Sbjct: 61  FMWLIDHKKKAQVMHTMWLIESNRLWHGNTSASLQADDMH-FIEIVRTLLQIFDDNVETY 119

Query: 586 WFSKRFTEVVKNMQKDLNKLKEAFYNMLDKQDGELYIYLQDINALE--VIPLVNWFNCCF 759
           W +K F +  + ++K+  KLKE   N+L ++D  L  +L+ +   +     L NW+  CF
Sbjct: 120 WIAKGFYKYTRELKKECVKLKEQTQNILKREDLSLLNHLELLGLFDGNSTLLDNWYITCF 179

Query: 760 AGI 768
           AGI
Sbjct: 180 AGI 182


>AY052062-1|AAK93486.1|  399|Drosophila melanogaster LP10120p
           protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +1

Query: 325 YEYVMKQRTEQY-QDLLYAVEKLQLIEPSEIYDGS-----GTPQSKVFLEMWVLENEEWK 486
           Y++  K+  E Y QDL    +  +++ P+ +Y  +     G       +E +    E+++
Sbjct: 305 YDWGTKKNNELYGQDLPPDYDLSKIVAPTHLYSSTNDALCGPEDVNTLVENFPHLTEDYR 364

Query: 487 PPIFPETNFNSADTFLPIAKTLRELYDDPV 576
            P+    +FN  D F+ IAK ++EL +DP+
Sbjct: 365 VPV---QSFNHLD-FI-IAKNMKELVNDPI 389


>AE014296-3372|AAF51606.1|  399|Drosophila melanogaster CG5932-PA
           protein.
          Length = 399

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +1

Query: 325 YEYVMKQRTEQY-QDLLYAVEKLQLIEPSEIYDGS-----GTPQSKVFLEMWVLENEEWK 486
           Y++  K+  E Y QDL    +  +++ P+ +Y  +     G       +E +    E+++
Sbjct: 305 YDWGTKKNNELYGQDLPPDYDLSKIVAPTHLYSSTNDALCGPEDVNTLVENFPHLTEDYR 364

Query: 487 PPIFPETNFNSADTFLPIAKTLRELYDDPV 576
            P+    +FN  D F+ IAK ++EL +DP+
Sbjct: 365 VPV---QSFNHLD-FI-IAKNMKELVNDPI 389


>AY058292-1|AAL13521.1|  520|Drosophila melanogaster GH05422p
           protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 704 CK*IYNSPSCLSNIL*NASFNLLRSFCMFFTTSVNLLLNQ 585
           C  + N+P+ +  I  +A++N+   FC FF    +L +NQ
Sbjct: 214 CDVVVNTPTFIMKI--DATYNMYHHFCDFFNLYASLFVNQ 251


>AE014134-404|AAF51259.1|  520|Drosophila melanogaster CG9867-PA
           protein.
          Length = 520

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 704 CK*IYNSPSCLSNIL*NASFNLLRSFCMFFTTSVNLLLNQ 585
           C  + N+P+ +  I  +A++N+   FC FF    +L +NQ
Sbjct: 214 CDVVVNTPTFIMKI--DATYNMYHHFCDFFNLYASLFVNQ 251


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,812,521
Number of Sequences: 53049
Number of extensions: 726641
Number of successful extensions: 2104
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2100
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)