Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30o12
         (258 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   0.45 
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   4.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           21   5.6  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    21   5.6  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    21   9.8  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 26  HDCRSPTLLRKFPSESLFVGGN 91
           HDC S   LR  PS+ LFV G+
Sbjct: 205 HDCISSFTLRLKPSDLLFVIGD 226


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 42  PLCCENSQVKVCSSVVTLK 98
           PL C ++  KV SSV+T K
Sbjct: 536 PLTCLSNLNKVLSSVITQK 554


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 44  TLLRKFPSESLFVGGNTKINSATGSXDYH 130
           T L  + S + ++G   ++ +A  S D+H
Sbjct: 837 TTLMSYSSNNDYIGSLVQVKNALVSSDHH 865


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 190 LFIIFIDFHLFVKITLLINYMVVXASGCTVDFSVTTD 80
           +FI F      +    LIN M +  S C   F V+T+
Sbjct: 22  IFIPFPSVECAMTRKQLINSMDMMRSACAPKFKVSTE 58


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 142 LINYMVVXASGCTVDFSVTTD 80
           LIN M +  S C   F V+T+
Sbjct: 40  LINSMDMMRSACAPKFKVSTE 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,235
Number of Sequences: 2352
Number of extensions: 3368
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 14058336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)