Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30o12
(258 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical ... 29 0.60
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 28 1.1
AF016442-1|AAB65918.1| 340|Caenorhabditis elegans Hypothetical ... 27 1.4
Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical pr... 26 3.2
AF125964-3|ABA03110.1| 805|Caenorhabditis elegans Hypothetical ... 26 3.2
AF047655-2|ABD63245.1| 805|Caenorhabditis elegans Hypothetical ... 26 3.2
AF025465-10|AAB71023.1| 805|Caenorhabditis elegans Hypothetical... 26 3.2
AF016422-2|AAG24174.1| 805|Caenorhabditis elegans Hypothetical ... 26 3.2
AC024831-3|ABD63213.1| 805|Caenorhabditis elegans Hypothetical ... 26 3.2
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 25 5.6
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 25 5.6
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 25 5.6
Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z68114-1|CAA92152.1| 451|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z50742-2|CAA90616.1| 491|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z37092-7|CAA85457.1| 472|Caenorhabditis elegans Hypothetical pr... 25 7.4
AY037793-1|AAK94758.1| 472|Caenorhabditis elegans GLY-1 protein. 25 7.4
AY037792-2|AAK94757.1| 472|Caenorhabditis elegans GLY-1 protein. 25 7.4
AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical... 25 7.4
AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical... 25 7.4
>AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical
protein Y49C4A.8a protein.
Length = 536
Score = 28.7 bits (61), Expect = 0.60
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 257 DIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVN 138
DI+ + +F I S I T+RF+Y F R FI + N
Sbjct: 497 DIYTLFALFYIFVSTIIIVTIRFVYKFTRKHFILVKSKEN 536
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 233 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFRLH 105
FE I V IYN +S +RK +++ ++ + FRLH
Sbjct: 597 FEYFYHTIQRTLVPEIYNGIGMSIMRKMSALQEIKAEVAFRLH 639
>AF016442-1|AAB65918.1| 340|Caenorhabditis elegans Hypothetical
protein K12B6.3 protein.
Length = 340
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 14 ELRKHDCRSPTLLRKFPSESLFVGGNTKIN 103
E R HDC+ T LRKF L G K++
Sbjct: 137 ETRTHDCKDLTRLRKFFEAVLAYTGYAKVS 166
>Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical
protein K02B7.1 protein.
Length = 742
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 233 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFRLH 105
FE I V IYN +S +RK +++ ++ FRLH
Sbjct: 520 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 562
>AF125964-3|ABA03110.1| 805|Caenorhabditis elegans Hypothetical
protein W03G1.4 protein.
Length = 805
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 233 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFRLH 105
FE I V IYN +S +RK +++ ++ FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625
>AF047655-2|ABD63245.1| 805|Caenorhabditis elegans Hypothetical
protein C17B7.7 protein.
Length = 805
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 233 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFRLH 105
FE I V IYN +S +RK +++ ++ FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625
>AF025465-10|AAB71023.1| 805|Caenorhabditis elegans Hypothetical
protein K02E7.3 protein.
Length = 805
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 233 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFRLH 105
FE I V IYN +S +RK +++ ++ FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625
>AF016422-2|AAG24174.1| 805|Caenorhabditis elegans Hypothetical
protein R09E12.6 protein.
Length = 805
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 233 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFRLH 105
FE I V IYN +S +RK +++ ++ FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625
>AC024831-3|ABD63213.1| 805|Caenorhabditis elegans Hypothetical
protein Y55F3C.6 protein.
Length = 805
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 233 FEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFRLH 105
FE I V IYN +S +RK +++ ++ FRLH
Sbjct: 583 FEYFYHTIQRTLVPEIYNGLGMSIMRKMSALQEIKTEAAFRLH 625
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 62 PSESLFVGGN-TKINSATGSXDYHI 133
PSESLFVGG I + GS Y +
Sbjct: 20 PSESLFVGGRVVTIETDNGSKRYEL 44
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 62 PSESLFVGGN-TKINSATGSXDYHI 133
PSESLFVGG I + GS Y +
Sbjct: 20 PSESLFVGGRVVTIETDNGSKRYEL 44
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +2
Query: 62 PSESLFVGGN-TKINSATGSXDYHI 133
PSESLFVGG I + GS Y +
Sbjct: 18 PSESLFVGGRVVTIETDNGSKRYEL 42
>Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical
protein T21B4.7 protein.
Length = 328
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 245 IEVMFEISNSVINANTVRFIYNFYRLSFIRKN 150
I ++FE +S+I N RF N YR+ +I N
Sbjct: 120 IILLFENRSSMILENKFRFSINLYRVIWIFLN 151
>Z68114-1|CAA92152.1| 451|Caenorhabditis elegans Hypothetical
protein F17A2.1 protein.
Length = 451
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 239 VMFEIS-NSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSL 120
VM++ S +I TVR + Y++ I KN ++ L+G +
Sbjct: 275 VMYKGSLQKIIAVQTVRHVDYQYQIYIINKNKPIDILFGEV 315
>Z50742-2|CAA90616.1| 491|Caenorhabditis elegans Hypothetical
protein K09A11.2 protein.
Length = 491
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 202 IQFVLFIIFIDFHLFVKIT 146
+ FV+FIIF FH + K++
Sbjct: 6 LAFVIFIIFYVFHFYWKVS 24
>Z37092-7|CAA85457.1| 472|Caenorhabditis elegans Hypothetical
protein F44F4.6 protein.
Length = 472
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -2
Query: 257 DIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFR 111
D HF V EI NS +T+ +NF R+ R+ YG + ++
Sbjct: 89 DWHFDWVEHEIFNSRNVCSTIDKYFNFTRIPSSREEAEYPLAYGLVVYK 137
>AY037793-1|AAK94758.1| 472|Caenorhabditis elegans GLY-1 protein.
Length = 472
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -2
Query: 257 DIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFR 111
D HF V EI NS +T+ +NF R+ R+ YG + ++
Sbjct: 89 DWHFDWVEHEIFNSRNVCSTIDKYFNFTRIPSSREEAEYPLAYGLVVYK 137
>AY037792-2|AAK94757.1| 472|Caenorhabditis elegans GLY-1 protein.
Length = 472
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -2
Query: 257 DIHFIEVMFEISNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLXFR 111
D HF V EI NS +T+ +NF R+ R+ YG + ++
Sbjct: 89 DWHFDWVEHEIFNSRNVCSTIDKYFNFTRIPSSREEAEYPLAYGLVVYK 137
>AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 163 LFVKITLLINYMVVXASGCTVDFS 92
+F T+ +NY VV S C +DFS
Sbjct: 197 IFPNGTVWMNYRVVVESPCEMDFS 220
>AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 163 LFVKITLLINYMVVXASGCTVDFS 92
+F T+ +NY VV S C +DFS
Sbjct: 197 IFPNGTVWMNYRVVVESPCEMDFS 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,174,948
Number of Sequences: 27780
Number of extensions: 79667
Number of successful extensions: 221
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 12,740,198
effective HSP length: 64
effective length of database: 10,962,278
effective search space used: 230207838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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