Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30o03
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003271-1|AAO25028.1|  489|Drosophila melanogaster LD17340p pro...    56   7e-08
AE014134-1094|AAS64645.1|  489|Drosophila melanogaster CG9526-PB...    56   7e-08
AE014134-1093|AAF52384.1|  489|Drosophila melanogaster CG9526-PA...    56   7e-08

>BT003271-1|AAO25028.1|  489|Drosophila melanogaster LD17340p
           protein.
          Length = 489

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 49/243 (20%), Positives = 92/243 (37%), Gaps = 13/243 (5%)
 Frame = +1

Query: 100 DIVYYSSLLVCISLGRNYRKISDIEMKRNYXXXXXXXXXXXXXXRYLYHAIIMVWGNIVI 279
           D++Y   LL CI  G   +KI+D   ++                 +  H  + +      
Sbjct: 5   DVIYVICLLGCIGAGSYVKKIADEGQRKLVSTGLGVLVVVIVSGLHSLHCFVSLALGTAA 64

Query: 280 IKCCERRYVHQMSLGFTWLDLLYIHCNVDDAVYAI-----WVHQTIALRLVGLAFELNSA 444
           +        H ++    +  L++    + D  + I      +   + L++ G+AFE  +A
Sbjct: 65  VLLVHPSKGHLVTFAVMFGYLVFFR--IFDFYFGIPGHTNMIQMILTLKVSGIAFEKTAA 122

Query: 445 --------DMTKLEQKPGPSSVKINIADVDSIHVEPYAVDIIAYAFFFVGLHKDSYYRWA 600
                   +  K +Q+       I I D D       A +I+ Y+F ++G+    YYR+ 
Sbjct: 123 WKRLQAHDEQKKNDQRDVHQESPIEITDYDVELQSLSAAEILHYSFNYIGVLTGPYYRYR 182

Query: 601 VFNDHFRNSLSSIGDCRTLTEQKLKKAFLSCIAYFLLRMKYSPTVYTNEKFYEDYAVDIR 780
            + D+F     +       T +KLK A   C  Y      +      +++F+ D +   R
Sbjct: 183 TYRDYFEMPFKTYAPTVEATLEKLKYAVFYCALYLATNYMWPLDYALSDEFFNDRSFVYR 242

Query: 781 YLY 789
            LY
Sbjct: 243 LLY 245


>AE014134-1094|AAS64645.1|  489|Drosophila melanogaster CG9526-PB,
           isoform B protein.
          Length = 489

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 49/243 (20%), Positives = 92/243 (37%), Gaps = 13/243 (5%)
 Frame = +1

Query: 100 DIVYYSSLLVCISLGRNYRKISDIEMKRNYXXXXXXXXXXXXXXRYLYHAIIMVWGNIVI 279
           D++Y   LL CI  G   +KI+D   ++                 +  H  + +      
Sbjct: 5   DVIYVICLLGCIGAGSYVKKIADEGQRKLVSTGLGVLVVVIVSGLHSLHCFVSLALGTAA 64

Query: 280 IKCCERRYVHQMSLGFTWLDLLYIHCNVDDAVYAI-----WVHQTIALRLVGLAFELNSA 444
           +        H ++    +  L++    + D  + I      +   + L++ G+AFE  +A
Sbjct: 65  VLLVHPSKGHLVTFAVMFGYLVFFR--IFDFYFGIPGHTNMIQMILTLKVSGIAFEKTAA 122

Query: 445 --------DMTKLEQKPGPSSVKINIADVDSIHVEPYAVDIIAYAFFFVGLHKDSYYRWA 600
                   +  K +Q+       I I D D       A +I+ Y+F ++G+    YYR+ 
Sbjct: 123 WKRLQAHDEQKKNDQRDVHQESPIEITDYDVELQSLSAAEILHYSFNYIGVLTGPYYRYR 182

Query: 601 VFNDHFRNSLSSIGDCRTLTEQKLKKAFLSCIAYFLLRMKYSPTVYTNEKFYEDYAVDIR 780
            + D+F     +       T +KLK A   C  Y      +      +++F+ D +   R
Sbjct: 183 TYRDYFEMPFKTYAPTVEATLEKLKYAVFYCALYLATNYMWPLDYALSDEFFNDRSFVYR 242

Query: 781 YLY 789
            LY
Sbjct: 243 LLY 245


>AE014134-1093|AAF52384.1|  489|Drosophila melanogaster CG9526-PA,
           isoform A protein.
          Length = 489

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 49/243 (20%), Positives = 92/243 (37%), Gaps = 13/243 (5%)
 Frame = +1

Query: 100 DIVYYSSLLVCISLGRNYRKISDIEMKRNYXXXXXXXXXXXXXXRYLYHAIIMVWGNIVI 279
           D++Y   LL CI  G   +KI+D   ++                 +  H  + +      
Sbjct: 5   DVIYVICLLGCIGAGSYVKKIADEGQRKLVSTGLGVLVVVIVSGLHSLHCFVSLALGTAA 64

Query: 280 IKCCERRYVHQMSLGFTWLDLLYIHCNVDDAVYAI-----WVHQTIALRLVGLAFELNSA 444
           +        H ++    +  L++    + D  + I      +   + L++ G+AFE  +A
Sbjct: 65  VLLVHPSKGHLVTFAVMFGYLVFFR--IFDFYFGIPGHTNMIQMILTLKVSGIAFEKTAA 122

Query: 445 --------DMTKLEQKPGPSSVKINIADVDSIHVEPYAVDIIAYAFFFVGLHKDSYYRWA 600
                   +  K +Q+       I I D D       A +I+ Y+F ++G+    YYR+ 
Sbjct: 123 WKRLQAHDEQKKNDQRDVHQESPIEITDYDVELQSLSAAEILHYSFNYIGVLTGPYYRYR 182

Query: 601 VFNDHFRNSLSSIGDCRTLTEQKLKKAFLSCIAYFLLRMKYSPTVYTNEKFYEDYAVDIR 780
            + D+F     +       T +KLK A   C  Y      +      +++F+ D +   R
Sbjct: 183 TYRDYFEMPFKTYAPTVEATLEKLKYAVFYCALYLATNYMWPLDYALSDEFFNDRSFVYR 242

Query: 781 YLY 789
            LY
Sbjct: 243 LLY 245


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,551,635
Number of Sequences: 53049
Number of extensions: 642802
Number of successful extensions: 1527
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)