Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte30o03
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80847-7|AAO91744.1|  778|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U80847-6|AAK68190.1|  796|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U80847-5|AAK68189.1|  793|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical pr...    29   5.0  
U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical pr...    29   5.0  

>U80847-7|AAO91744.1|  778|Caenorhabditis elegans Hypothetical
           protein C17H11.6c protein.
          Length = 778

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 694 CNSKMPSSAFVRLGSCSHR 638
           C +KMP SAF +L  C HR
Sbjct: 88  CAAKMPGSAFPKLKGCQHR 106


>U80847-6|AAK68190.1|  796|Caenorhabditis elegans Hypothetical
           protein C17H11.6b protein.
          Length = 796

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 694 CNSKMPSSAFVRLGSCSHR 638
           C +KMP SAF +L  C HR
Sbjct: 88  CAAKMPGSAFPKLKGCQHR 106


>U80847-5|AAK68189.1|  793|Caenorhabditis elegans Hypothetical
           protein C17H11.6a protein.
          Length = 793

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 694 CNSKMPSSAFVRLGSCSHR 638
           C +KMP SAF +L  C HR
Sbjct: 88  CAAKMPGSAFPKLKGCQHR 106


>U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical
           protein ZK1127.9a protein.
          Length = 914

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 22/70 (31%), Positives = 30/70 (42%)
 Frame = -1

Query: 738 INRRRIFHSQQKIGNATQKCLLQLLFG*GPAVTDRTERVPKMIIEYRPTIITIFMEANEE 559
           +NR  I+   Q     TQ  L QL+        +R ER+P   I   P     + E N  
Sbjct: 184 VNRNTIWERPQNAKIVTQPELAQLIHRATEEEKNREERMPHGQIPQNPD--DAWNEFNAP 241

Query: 558 EGIRYNINSI 529
           +G +Y  NSI
Sbjct: 242 DGRKYYFNSI 251


>U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical
           protein ZK1127.9b protein.
          Length = 905

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 22/70 (31%), Positives = 30/70 (42%)
 Frame = -1

Query: 738 INRRRIFHSQQKIGNATQKCLLQLLFG*GPAVTDRTERVPKMIIEYRPTIITIFMEANEE 559
           +NR  I+   Q     TQ  L QL+        +R ER+P   I   P     + E N  
Sbjct: 175 VNRNTIWERPQNAKIVTQPELAQLIHRATEEEKNREERMPHGQIPQNPD--DAWNEFNAP 232

Query: 558 EGIRYNINSI 529
           +G +Y  NSI
Sbjct: 233 DGRKYYFNSI 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,124,358
Number of Sequences: 27780
Number of extensions: 349281
Number of successful extensions: 768
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)