Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30o02
(744 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein. 240 3e-63
BT009796-1|AAP88798.1| 333|Homo sapiens electron-transfer-flavo... 240 3e-63
BC095457-1|AAH95457.1| 333|Homo sapiens electron-transfer-flavo... 240 3e-63
BC015526-1|AAH15526.1| 333|Homo sapiens electron-transfer-flavo... 240 3e-63
AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer flavo... 240 3e-63
AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens ... 32 2.5
AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein. 32 2.5
>J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein.
Length = 333
Score = 240 bits (588), Expect = 3e-63
Identities = 119/202 (58%), Positives = 152/202 (75%)
Frame = +3
Query: 138 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 317
+ L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC A+ + K G
Sbjct: 13 AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72
Query: 318 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 497
I+KVLVA+ DV+KG E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73 IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132
Query: 498 TDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGD 677
+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F A GGSA+ +KA
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKA-SST 191
Query: 678 YKTDLVEFLKQELTKSDRPELT 743
++ E+L Q+LTKSDRPELT
Sbjct: 192 SPVEISEWLDQKLTKSDRPELT 213
>BT009796-1|AAP88798.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 240 bits (588), Expect = 3e-63
Identities = 119/202 (58%), Positives = 152/202 (75%)
Frame = +3
Query: 138 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 317
+ L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC A+ + K G
Sbjct: 13 AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72
Query: 318 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 497
I+KVLVA+ DV+KG E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73 IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132
Query: 498 TDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGD 677
+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F A GGSA+ +KA
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKA-SST 191
Query: 678 YKTDLVEFLKQELTKSDRPELT 743
++ E+L Q+LTKSDRPELT
Sbjct: 192 SPVEISEWLDQKLTKSDRPELT 213
>BC095457-1|AAH95457.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 240 bits (588), Expect = 3e-63
Identities = 119/202 (58%), Positives = 152/202 (75%)
Frame = +3
Query: 138 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 317
+ L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC A+ + K G
Sbjct: 13 AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72
Query: 318 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 497
I+KVLVA+ DV+KG E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73 IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132
Query: 498 TDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGD 677
+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F A GGSA+ +KA
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKA-SST 191
Query: 678 YKTDLVEFLKQELTKSDRPELT 743
++ E+L Q+LTKSDRPELT
Sbjct: 192 SPVEISEWLDQKLTKSDRPELT 213
>BC015526-1|AAH15526.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 240 bits (588), Expect = 3e-63
Identities = 119/202 (58%), Positives = 152/202 (75%)
Frame = +3
Query: 138 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 317
+ L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC A+ + K G
Sbjct: 13 AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72
Query: 318 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 497
I+KVLVA+ DV+KG E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73 IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132
Query: 498 TDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGD 677
+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F A GGSA+ +KA
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKA-SST 191
Query: 678 YKTDLVEFLKQELTKSDRPELT 743
++ E+L Q+LTKSDRPELT
Sbjct: 192 SPVEISEWLDQKLTKSDRPELT 213
>AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer
flavoprotein alpha-subunit protein.
Length = 333
Score = 240 bits (588), Expect = 3e-63
Identities = 119/202 (58%), Positives = 152/202 (75%)
Frame = +3
Query: 138 SGQLRRLQSTLVLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANG 317
+ L R QSTLV+AEH N+ L+P T NT+ AA ++GG+VS LVAGTKC A+ + K G
Sbjct: 13 AASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAG 72
Query: 318 ISKVLVAESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPI 497
I+KVLVA+ DV+KG E LTPLILATQKQF +THI A A+AFGK +LPRVAAKL+V+PI
Sbjct: 73 IAKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPI 132
Query: 498 TDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGD 677
+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F A GGSA+ +KA
Sbjct: 133 SDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKA-SST 191
Query: 678 YKTDLVEFLKQELTKSDRPELT 743
++ E+L Q+LTKSDRPELT
Sbjct: 192 SPVEISEWLDQKLTKSDRPELT 213
>AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens
cDNA FLJ39359 fis, clone PEBLM2004290. ).
Length = 738
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 547 MLVTLY*PLRPKILSRSSLFVAQHSLQSHWREGLQQLIKHLRATIRL 687
ML L + K++ + + Q W +GLQ+ +KHL+ +I+L
Sbjct: 11 MLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKGSIQL 57
>AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein.
Length = 2467
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 547 MLVTLY*PLRPKILSRSSLFVAQHSLQSHWREGLQQLIKHLRATIRL 687
ML L + K++ + + Q W +GLQ+ +KHL+ +I+L
Sbjct: 340 MLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKGSIQL 386
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,531,436
Number of Sequences: 237096
Number of extensions: 2299817
Number of successful extensions: 17649
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17644
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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