Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte30o01
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117195-16|CAB55026.1| 186|Caenorhabditis elegans Hypothetical... 110 9e-25
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 101 7e-22
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 36 0.042
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 36 0.042
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 32 0.39
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 29 2.7
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 29 2.7
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 29 2.7
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 29 3.6
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 29 3.6
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 29 4.8
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 29 4.8
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 29 4.8
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 29 4.8
AC006708-16|AAF60431.2| 312|Caenorhabditis elegans Hypothetical... 29 4.8
Z81044-3|CAB02808.1| 178|Caenorhabditis elegans Hypothetical pr... 28 6.3
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 28 6.3
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 28 6.3
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 28 6.3
>AL117195-16|CAB55026.1| 186|Caenorhabditis elegans Hypothetical
protein Y57A10A.23 protein.
Length = 186
Score = 110 bits (265), Expect = 9e-25
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Frame = +2
Query: 86 LIMVAGALAKTLCSFIFHKVKCEAGKDNGFGRSYIWAGSLESGIQIATNHKKPVMVIIHK 265
L+++A A SF K + GFG W E I+ A + KP+ ++IHK
Sbjct: 4 LLLLALVSASAYASFDKIKDSIQNPLARGFGDDIAWV-KWEDAIETALDTDKPIFLLIHK 62
Query: 266 SWCTACKKLKPKFASSID---LQNLSKHFVMINLVDEEEPASSAFAPDGNYIPRIIFLSP 436
SWC ACK LK F S + LS+HFVM+N D++EP + PDG YIPR++FL
Sbjct: 63 SWCHACKALKKTFQQSNAKKAFKKLSEHFVMVNTEDDDEPFEEEYRPDGKYIPRLLFLDK 122
Query: 437 EGSVDHDIYNEDGS-SQHKYFYSKPEQIVKSMRKILEKY 550
G + + N+ + Y+YS P I+ SM+ +L+ +
Sbjct: 123 NGDLLQEFKNKKAEYKNYAYYYSSPADILNSMKDVLKHF 161
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 101 bits (241), Expect = 7e-22
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Frame = +2
Query: 167 NGFGRSYIWAGSLESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSI---DLQNLSK 337
+G+ + W + I IA + KP+ +IHK+WC ACK LK + SS +L LS+
Sbjct: 28 HGYPSAIEWV-EFDKAIGIAKDLNKPIFFLIHKTWCGACKSLKRELKSSPKTDELIILSR 86
Query: 338 HFVMINLVDEEEPASSAFAPDGNYIPRIIFLSPEGSVDHDIYNEDGSSQHKYFYSKPEQI 517
FVM+N+ D+EEP ++PDG YIPRI+FL +G+ NE +KYFY P QI
Sbjct: 87 KFVMVNVEDDEEPEDPKYSPDGGYIPRILFLDTDGN-PLKTNNERKYKNNKYFYPLPAQI 145
Query: 518 VKSMRKILEKY 550
+ M + L ++
Sbjct: 146 IDGMERALLEF 156
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 35.5 bits (78), Expect = 0.042
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 206 ESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEEEPASS 385
ES + N + V+V + WC CK L PK+ + DL + + VD E +
Sbjct: 30 ESNFEETINGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQAL 89
Query: 386 AFAPDGNYIPRIIF 427
A + P I++
Sbjct: 90 ASKFEVRGYPTILY 103
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 35.5 bits (78), Expect = 0.042
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 206 ESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEEEPASS 385
ES + N + V+V + WC CK L PK+ + DL + + VD E +
Sbjct: 30 ESNFEETINGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQAL 89
Query: 386 AFAPDGNYIPRIIF 427
A + P I++
Sbjct: 90 ASKFEVRGYPTILY 103
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +2
Query: 218 QIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEEEPASSAFAP 397
++ N K+P MV WC C+KL+P++ + + F ++ E A F
Sbjct: 166 KLVLNSKEPWMVEFFAPWCGHCQKLEPEWKKAAEEMGGRVKFGALDATAHESIAQK-FGI 224
Query: 398 DGNYIPRIIFLSPEGSVDHDIYNEDG 475
G P I F +P S D + G
Sbjct: 225 RG--FPTIKFFAPGTSSASDAEDYQG 248
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +2
Query: 218 QIATNHKKPVMVIIHKSWCTACKKLKPKFASSID-LQNLSKHFVMINLVDEEEPASSAFA 394
+I + K V++ + WC CK + K+ L+ + V+ + A S FA
Sbjct: 511 KIVNDESKDVLIEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQFA 570
Query: 395 PDGNYIPRIIFLSPEGSVDHDI 460
+G P I F +P G I
Sbjct: 571 VEG--FPTIYF-APAGKKSEPI 589
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +2
Query: 176 GRSYIWAGSLESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMIN 355
G S S+E + PV+V H WC C+ L P+ ++ + S IN
Sbjct: 10 GASVFDIDSVEDFTEKVIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKIN 69
Query: 356 L 358
+
Sbjct: 70 V 70
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 365 EEEPASSAFAPDGNYIPRIIFLSPEGSVDHDIYNEDGSSQHKYFYS-KPEQIVKSMRKIL 541
E E + FAP GN+ +F EG+ N D +Q F++ PE++VK +
Sbjct: 1005 EVETPNRVFAPTGNHFIHDVFSQIEGA------NMDSENQQNIFFNFPPEKLVKKPPVVP 1058
Query: 542 EKYKHEQ 562
++ EQ
Sbjct: 1059 KEVVQEQ 1065
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 218 QIATNHKKPVMVIIHKSWCTACKKLKP 298
Q+A ++ K V+V + WC CK+L P
Sbjct: 319 QVARDNTKNVLVEFYAPWCGHCKQLAP 345
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 218 QIATNHKKPVMVIIHKSWCTACKKLKP 298
Q+A ++ K V+V + WC CK+L P
Sbjct: 253 QVARDNTKNVLVEFYAPWCGHCKQLAP 279
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 218 QIATNHKKPVMVIIHKSWCTACKKLKP 298
Q+A ++ K V+V + WC CK+L P
Sbjct: 375 QVARDNTKNVLVEFYAPWCGHCKQLAP 401
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 239 KPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVD 364
K V++ + WC CK L PK+ + L+K V+I +D
Sbjct: 381 KDVLIEFYAPWCGHCKSLAPKYEEL--AEKLNKEDVIIAKMD 420
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 239 KPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVD 364
K V++ + WC CK L PK+ + L+K V+I +D
Sbjct: 381 KDVLIEFYAPWCGHCKSLAPKYEEL--AEKLNKEDVIIAKMD 420
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 218 QIATNHKKPVMVI-IHKSWCTACKKLKPKFASSIDLQNLSKHFVMINL-VDEEEPASSAF 391
Q+ H + ++++ + +WC CK + P + +L K + + VDE E S +
Sbjct: 20 QLIRQHPEKIIILDFYATWCGPCKAIAPLYK---ELATTHKGIIFCKVDVDEAEDLCSKY 76
Query: 392 APDGNYIPRIIF 427
D +P IF
Sbjct: 77 --DVKMMPTFIF 86
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 218 QIATNHKKPVMVI-IHKSWCTACKKLKPKFASSIDLQNLSKHFVMINL-VDEEEPASSAF 391
Q+ H + ++++ + +WC CK + P + +L K + + VDE E S +
Sbjct: 19 QLIRQHPEKIIILDFYATWCGPCKAIAPLYK---ELATTHKGIIFCKVDVDEAEDLCSKY 75
Query: 392 APDGNYIPRIIF 427
D +P IF
Sbjct: 76 --DVKMMPTFIF 85
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 218 QIATNHKKPVMVI-IHKSWCTACKKLKPKFASSIDLQNLSKHFVMINL-VDEEEPASSAF 391
Q+ H + ++++ + +WC CK + P + +L K + + VDE E S +
Sbjct: 19 QLIRQHPEKIIILDFYATWCGPCKAIAPLYK---ELATTHKGIIFCKVDVDEAEDLCSKY 75
Query: 392 APDGNYIPRIIF 427
D +P IF
Sbjct: 76 --DVKMMPTFIF 85
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 218 QIATNHKKPVMVI-IHKSWCTACKKLKPKFASSIDLQNLSKHFVMINL-VDEEEPASSAF 391
Q+ H + ++++ + +WC CK + P + +L K + + VDE E S +
Sbjct: 20 QLIRQHPEKIIILDFYATWCGPCKAIAPLYK---ELATTHKGIIFCKVDVDEAEDLCSKY 76
Query: 392 APDGNYIPRIIF 427
D +P IF
Sbjct: 77 --DVKMMPTFIF 86
>AC006708-16|AAF60431.2| 312|Caenorhabditis elegans Hypothetical
protein Y110A7A.7 protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +2
Query: 440 GSVDHDIYNEDGSSQHKYFYSKPEQIVKSMRKILEKYKHEQFDA*KIPNPHSMYGKYANL 619
G H ++N S H YFYS + + M K+L K D + HS+ G A++
Sbjct: 104 GRPKHKLHN--AGSVHYYFYSALKTMWSPMEKLLRGLKDSLPDHKIVFTGHSLGGAIASI 161
Query: 620 LEIYAIH*QPE 652
+ PE
Sbjct: 162 ASTVFVRNFPE 172
>Z81044-3|CAB02808.1| 178|Caenorhabditis elegans Hypothetical
protein C30H6.8 protein.
Length = 178
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Frame = +2
Query: 239 KPVMVIIHKSWCTACKKLKP---KFASSIDLQNLSKHFVMINLVDEEEPAS-----SAFA 394
K V+V WC +CK L P KF +++ + K+ ++ + ++E A
Sbjct: 52 KTVVVYFSAGWCGSCKFLTPKIKKFYNAVKESDAGKNLEIVWVSKDKEAAHQEEYYEKNL 111
Query: 395 PDGNYIP 415
PD YIP
Sbjct: 112 PDWPYIP 118
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 344 VMINLVDEEEPASSAFAPDGNYIPRIIFLSPEGSVDHDIYNE 469
+M L+DE + + A +G PR I L+P + IYNE
Sbjct: 610 IMARLIDENDLNT---AGEGGCYPRCIILTPTRELTDQIYNE 648
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 344 VMINLVDEEEPASSAFAPDGNYIPRIIFLSPEGSVDHDIYNE 469
+M L+DE + + A +G PR I L+P + IYNE
Sbjct: 610 IMARLIDENDLNT---AGEGGCYPRCIILTPTRELTDQIYNE 648
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 344 VMINLVDEEEPASSAFAPDGNYIPRIIFLSPEGSVDHDIYNE 469
+M L+DE + + A +G PR I L+P + IYNE
Sbjct: 610 IMARLIDENDLNT---AGEGGCYPRCIILTPTRELTDQIYNE 648
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,577,395
Number of Sequences: 27780
Number of extensions: 387250
Number of successful extensions: 1039
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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